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EMBER2 distance predictions for the human proteome

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kWeissenow/EMBER2_human

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EMBER2_human

EMBER2 inter-residue distance predictions for the human proteome (< 3000 residues)

Included files

Contact maps (8Å threshold)

Example:

Example contact map

Distance maps

Obtained from raw distance probability distributions by taking mean or mode.

Example:

Example distance map

Distograms / raw probability distributions

Distance probability distributions over 42 bins, with

  • bin #0 representing distances of 0-2Å
  • bins #1 to #40 covering distance intervals of 0.5Å each between 2Å and 22Å
  • bin #41 representing distances >22Å

Cite

  Weissenow, K., Heinzinger, M., Rost, B.
  Protein language model embeddings for fast, accurate, alignment-free protein structure prediction
  bioRxiv 2021.07.31.454572; doi: https://doi.org/10.1101/2021.07.31.454572

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EMBER2 distance predictions for the human proteome

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