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  1. tiny tiny Public

    Whole genome alignments using LastZ software in vertebrate species. Code (1) drives embarrassingly parallel execution of commands, (2) merge output into sensible formats and (3) provides ways to dr…

    R 7 3

  2. Annotation Annotation Public

    OUTDATED, use Annotation_AusARG instead

    Shell 2

  3. dcomp dcomp Public

    Sex chromosome dosage compensation across vertebrates

    R 1 1

  4. koala koala Public

    Perl

  5. methlab methlab Public

    Methylation in pogona

  6. pogo pogo Public

    Assembly and things

    Perl

Repositories

Showing 10 of 19 repositories
  • pogo Public

    Assembly and things

    kango2/pogo’s past year of commit activity
    Perl 0 MIT 0 2 0 Updated Nov 2, 2024
  • chromsyn Public Forked from slimsuite/chromsyn

    Chromosome-level synteny plotting using orthologous regions

    kango2/chromsyn’s past year of commit activity
    R 0 GPL-3.0 5 0 0 Updated Oct 21, 2024
  • RepeatMasker Public Forked from Dfam-consortium/RepeatMasker

    RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

    kango2/RepeatMasker’s past year of commit activity
    Perl 0 50 0 0 Updated Sep 26, 2024
  • ausarg Public

    This repository contains information and code for AusARG genome assemblies.

    kango2/ausarg’s past year of commit activity
    Nextflow 0 0 1 0 Updated Sep 26, 2024
  • basdu Public

    This repository contains publication figures, relevant code and data tables.

    kango2/basdu’s past year of commit activity
    Perl 0 MIT 0 0 0 Updated Aug 28, 2024
  • pogors Public

    Repo for RepeatModeler and Trinity script

    kango2/pogors’s past year of commit activity
    Shell 0 0 0 0 Updated Jul 22, 2024
  • Annotation_AusARG Public

    Repo containing annotation script for AusARG assembly pipeline

    kango2/Annotation_AusARG’s past year of commit activity
    Shell 0 0 2 0 Updated Jun 8, 2024
  • koala Public
    kango2/koala’s past year of commit activity
    Perl 0 MIT 0 1 0 Updated May 31, 2024
  • dcomp Public

    Sex chromosome dosage compensation across vertebrates

    kango2/dcomp’s past year of commit activity
    R 1 MIT 1 0 0 Updated May 15, 2024
  • Rsx_prot Public

    Protein interactome of the lncRNA RSX

    kango2/Rsx_prot’s past year of commit activity
    R 0 0 0 0 Updated May 10, 2024

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