Seminar on sample mix-ups
These are slides for a seminar on Identifying sample mix-ups in eQTL data, for the OSGA Webinar Series on 11 June 2021.
Most of the data used here is not yet public, so you may not be able to build these slides yourself.
Needed libraries:
Related papers:
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Broman et al. (2015) Identification and correction of sample mix-ups in expression genetic data: A case study. G3 (Bethesda) 5:2177-2186 doi:10.1534/g3.115.019778
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Broman et al. (2019) Cleaning genotype data from Diversity Outbred mice. G3 (Bethesda) 9:1571-1579 doi:10.1534/g3.119.400165
License
To the extent possible under law,
Karl Broman
has waived all copyright and related or neighboring rights to
“Identifying sample mix-ups in eQTL data”.
This work is published from the United States.
