This repository contains documentation and code for analyzing human leukocyte antigen (HLA) genes in DNA and RNA sequencing data, using HISAT2, HISAT-genotype, and HLA-HAT.
https://hlahat.readthedocs.io/en/latest/index.html
Any academic or scholarly publication arising from the use of this Software or any derivative works thereof will include the following acknowledgment: The Software used in this research was created by Katie Campbell of UCLA.