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Could the java documentation and the process of embedding grobid into Java project be updated? #577
Comments
Honestly, the entire process of using the API is outdated on the site. |
Hello @lucaspada894 ! We've just made a new release, so all the documentation and the grobid modules/demos in the other repo have not been tested and updated yet, it will take a few days/weeks... sorry (this is a side project for us, everything is slow slow pace here :). In between, you can look at the class: |
For some reason the function fullTextToTei hangs indefinitely for me. I am
currently using your API to create a pipeline for coronavirus PDFs to a
structure that my University needs.
…On Fri, May 1, 2020, 2:28 AM Patrice Lopez ***@***.***> wrote:
Hello @lucaspada894 <https://github.com/lucaspada894> !
We've just made a new release, so all the documentation and the grobid
modules/demos in the other repo have not been tested and updated yet, it
will take a few days/weeks... sorry (this is a side project for us,
everything is slow slow pace here :).
In between, you can look at the class:
grobid/grobid-core/src/main/java/org/grobid/core/engines/Engine.java
which is basically the Java API to use.
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|
@lucaspada894 could you share the snippet / code you're using? |
I call the function from the Engine instance created by
GrobidFactory.getInstance().create engine()
…On Fri, May 1, 2020, 2:28 AM Patrice Lopez ***@***.***> wrote:
Hello @lucaspada894 <https://github.com/lucaspada894> !
We've just made a new release, so all the documentation and the grobid
modules/demos in the other repo have not been tested and updated yet, it
will take a few days/weeks... sorry (this is a side project for us,
everything is slow slow pace here :).
In between, you can look at the class:
grobid/grobid-core/src/main/java/org/grobid/core/engines/Engine.java
which is basically the Java API to use.
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<#577 (comment)>,
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|
I will send it to you later today. I haven't slept and am exhausted.
…On Fri, May 1, 2020, 7:11 AM Luca Foppiano ***@***.***> wrote:
@lucaspada894 <https://github.com/lucaspada894> could you share the
snippet / code you're using?
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What is your timeline?
…On Fri, May 1, 2020, 7:11 AM Luca Foppiano ***@***.***> wrote:
@lucaspada894 <https://github.com/lucaspada894> could you share the
snippet / code you're using?
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No worries, anytime is good. I'll try to answer quckly but allow some time ;-) |
Meanwhile, have you looked at the grobid-example sample project? https://github.com/kermitt2/grobid-example |
@lucaspada894 maybe try this https://github.com/kermitt2/article-dataset-builder From my experience, when it comes to pipeline for scientific articles, using web services is much more convenient. |
try {
String pGrobidHome = "lib/grobid/grobid-home";
String pGrobidProperties =
"D:\\Projects\\pdf_to_boac_schema\\lib\\grobid\\grobid-home\\config\\grobid.properties";
// The GrobidHomeFinder can be instantiate without parameters to
verify the grobid home in the standard
// location (classpath, ../grobid-home, ../../grobid-home)
// If the location is customised:
GrobidHomeFinder grobidHomeFinder = new
GrobidHomeFinder(Arrays.asList(pGrobidHome));
GrobidProperties.getInstance(grobidHomeFinder);
//The GrobidProperties needs to be instantiate using the correct
grobidHomeFinder or it will use the default
//locations
System.out.println(">>>>>>>>
GROBID_HOME="+GrobidProperties.get_GROBID_HOME_PATH());
Engine engine = GrobidFactory.getInstance().createEngine();
// Biblio object for the result
BiblioItem resHeader = new BiblioItem();
String tei =
engine.processHeader("lib/PDF_FILES/2020.03.23.004580v1.full.pdf", 1,
resHeader);
}
…On Fri, May 1, 2020 at 9:31 AM Patrice Lopez ***@***.***> wrote:
@lucaspada894 <https://github.com/lucaspada894> maybe try this
https://github.com/kermitt2/article-dataset-builder
you will get very high rate of OA PDF processed by Grobid without pain -
for instance, for the same article list, you will get more full structured
full texts than the official CORD-19 dataset, and significantly
better/richer structuring with the latest version of Grobid (CORD-19 is
also based on Grobid conversion, but not the latest version from what I
have seen).
From my experience, when it comes to pipeline for scientific articles,
using web services is much more convenient.
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|
This is an attempt at testing it out with the same code provided in the
example project.
…On Fri, May 1, 2020 at 6:21 PM Gian Spadafora ***@***.***> wrote:
try {
String pGrobidHome = "lib/grobid/grobid-home";
String pGrobidProperties = "D:\\Projects\\pdf_to_boac_schema\\lib\\grobid\\grobid-home\\config\\grobid.properties";
// The GrobidHomeFinder can be instantiate without parameters to verify the grobid home in the standard
// location (classpath, ../grobid-home, ../../grobid-home)
// If the location is customised:
GrobidHomeFinder grobidHomeFinder = new GrobidHomeFinder(Arrays.asList(pGrobidHome));
GrobidProperties.getInstance(grobidHomeFinder);
//The GrobidProperties needs to be instantiate using the correct grobidHomeFinder or it will use the default
//locations
System.out.println(">>>>>>>> GROBID_HOME="+GrobidProperties.get_GROBID_HOME_PATH());
Engine engine = GrobidFactory.getInstance().createEngine();
// Biblio object for the result
BiblioItem resHeader = new BiblioItem();
String tei = engine.processHeader("lib/PDF_FILES/2020.03.23.004580v1.full.pdf", 1, resHeader);
}
On Fri, May 1, 2020 at 9:31 AM Patrice Lopez ***@***.***>
wrote:
> @lucaspada894 <https://github.com/lucaspada894> maybe try this
> https://github.com/kermitt2/article-dataset-builder
> you will get very high rate of OA PDF processed by Grobid without pain -
> for instance, for the same article list, you will get more full structured
> full texts than the official CORD-19 dataset, and significantly
> better/richer structuring with the latest version of Grobid (CORD-19 is
> also based on Grobid conversion, but not the latest version from what I
> have seen).
>
> From my experience, when it comes to pipeline for scientific articles,
> using web services is much more convenient.
>
> —
> You are receiving this because you were mentioned.
> Reply to this email directly, view it on GitHub
> <#577 (comment)>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/AIQAFKTR5HGAZI44VZUD5SLRPLMKNANCNFSM4MWZUKEA>
> .
>
|
I also do not know how to use the GrobiAnalysisConfig file and set it up
for the Engine.
…On Fri, May 1, 2020 at 6:22 PM Gian Spadafora ***@***.***> wrote:
This is an attempt at testing it out with the same code provided in the
example project.
On Fri, May 1, 2020 at 6:21 PM Gian Spadafora ***@***.***> wrote:
> try {
> String pGrobidHome = "lib/grobid/grobid-home";
> String pGrobidProperties = "D:\\Projects\\pdf_to_boac_schema\\lib\\grobid\\grobid-home\\config\\grobid.properties";
>
> // The GrobidHomeFinder can be instantiate without parameters to verify the grobid home in the standard
> // location (classpath, ../grobid-home, ../../grobid-home)
> // If the location is customised:
> GrobidHomeFinder grobidHomeFinder = new GrobidHomeFinder(Arrays.asList(pGrobidHome));
> GrobidProperties.getInstance(grobidHomeFinder);
>
> //The GrobidProperties needs to be instantiate using the correct grobidHomeFinder or it will use the default
> //locations
>
> System.out.println(">>>>>>>> GROBID_HOME="+GrobidProperties.get_GROBID_HOME_PATH());
>
> Engine engine = GrobidFactory.getInstance().createEngine();
>
> // Biblio object for the result
> BiblioItem resHeader = new BiblioItem();
> String tei = engine.processHeader("lib/PDF_FILES/2020.03.23.004580v1.full.pdf", 1, resHeader);
>
>
> }
>
>
> On Fri, May 1, 2020 at 9:31 AM Patrice Lopez ***@***.***>
> wrote:
>
>> @lucaspada894 <https://github.com/lucaspada894> maybe try this
>> https://github.com/kermitt2/article-dataset-builder
>> you will get very high rate of OA PDF processed by Grobid without pain -
>> for instance, for the same article list, you will get more full structured
>> full texts than the official CORD-19 dataset, and significantly
>> better/richer structuring with the latest version of Grobid (CORD-19 is
>> also based on Grobid conversion, but not the latest version from what I
>> have seen).
>>
>> From my experience, when it comes to pipeline for scientific articles,
>> using web services is much more convenient.
>>
>> —
>> You are receiving this because you were mentioned.
>> Reply to this email directly, view it on GitHub
>> <#577 (comment)>,
>> or unsubscribe
>> <https://github.com/notifications/unsubscribe-auth/AIQAFKTR5HGAZI44VZUD5SLRPLMKNANCNFSM4MWZUKEA>
>> .
>>
>
|
Sorry to be bothering you again, guys, but I need a solution urgently. I
need grobid to be packaged into my project. This means I cannot simply open
a terminal and start a Grobid service and then run my application
afterwards. I need it to be done seamlessly. Without understanding the APIs
I cannot do this.
…On Fri, May 1, 2020 at 8:39 PM Gian Spadafora ***@***.***> wrote:
I also do not know how to use the GrobiAnalysisConfig file and set it up
for the Engine.
On Fri, May 1, 2020 at 6:22 PM Gian Spadafora ***@***.***> wrote:
> This is an attempt at testing it out with the same code provided in the
> example project.
>
> On Fri, May 1, 2020 at 6:21 PM Gian Spadafora ***@***.***> wrote:
>
>> try {
>> String pGrobidHome = "lib/grobid/grobid-home";
>> String pGrobidProperties = "D:\\Projects\\pdf_to_boac_schema\\lib\\grobid\\grobid-home\\config\\grobid.properties";
>>
>> // The GrobidHomeFinder can be instantiate without parameters to verify the grobid home in the standard
>> // location (classpath, ../grobid-home, ../../grobid-home)
>> // If the location is customised:
>> GrobidHomeFinder grobidHomeFinder = new GrobidHomeFinder(Arrays.asList(pGrobidHome));
>> GrobidProperties.getInstance(grobidHomeFinder);
>>
>> //The GrobidProperties needs to be instantiate using the correct grobidHomeFinder or it will use the default
>> //locations
>>
>> System.out.println(">>>>>>>> GROBID_HOME="+GrobidProperties.get_GROBID_HOME_PATH());
>>
>> Engine engine = GrobidFactory.getInstance().createEngine();
>>
>> // Biblio object for the result
>> BiblioItem resHeader = new BiblioItem();
>> String tei = engine.processHeader("lib/PDF_FILES/2020.03.23.004580v1.full.pdf", 1, resHeader);
>>
>>
>> }
>>
>>
>> On Fri, May 1, 2020 at 9:31 AM Patrice Lopez ***@***.***>
>> wrote:
>>
>>> @lucaspada894 <https://github.com/lucaspada894> maybe try this
>>> https://github.com/kermitt2/article-dataset-builder
>>> you will get very high rate of OA PDF processed by Grobid without pain
>>> - for instance, for the same article list, you will get more full
>>> structured full texts than the official CORD-19 dataset, and significantly
>>> better/richer structuring with the latest version of Grobid (CORD-19 is
>>> also based on Grobid conversion, but not the latest version from what I
>>> have seen).
>>>
>>> From my experience, when it comes to pipeline for scientific articles,
>>> using web services is much more convenient.
>>>
>>> —
>>> You are receiving this because you were mentioned.
>>> Reply to this email directly, view it on GitHub
>>> <#577 (comment)>,
>>> or unsubscribe
>>> <https://github.com/notifications/unsubscribe-auth/AIQAFKTR5HGAZI44VZUD5SLRPLMKNANCNFSM4MWZUKEA>
>>> .
>>>
>>
|
The simplest and most efficient way to integrate grobid in an application is using the service, it provides multithreading, robustness, good documentation, docker, etc. There's a java client here. Using the Java API would be justified only I think if you need some low level data structures and functionalities, but for processing usual scientific articles this should not be necessary. You would then need to understand the API, implement your own parallelization, and so on, this is a very big effort for something already existing elsewhere. Having said that, if you stay on the Java API integration, everything is now updated, including the javadoc. Can you run the grobid-example sample project? If no, could you provide some error trace, info about your environment, jdk version? |
@lucaspada894 did you solve your problem or you still need help? |
Hello,
I went on and used it as a service. However, as of yesterday, I ran into a
new issue. The Grobid service crashes sometimes when it deals with some
table formats or corrupted PDFs. I am trying to process 44,000 files and
would like to know if there is a way for Grobid to simply skip a file that
results in error. I'm at the very last step of the process and this came up
as a big problem.
Any help would be greatly appreciated,
Gian Spadafora
…On Thu, May 21, 2020, 7:44 AM Luca Foppiano ***@***.***> wrote:
@lucaspada894 <https://github.com/lucaspada894> did you solve your
problem or you still need help?
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@lucaspada894 In principle the server does not crash for any of these kind of cases (it ran over 12M PDF without any crashes and 44K is not a lot at all) - but it could come from a recent update or over-loading the server without waiting when receiving a 503 response. Are you using Windows? how much memory and how many concurrent queries? Which version of GROBID are you using? Can you provide the server logs for the crashes? Optionally if you have a sharable problematic PDF for that, it can help. |
Yes, I will send you the logs and PDFs in a few minutes.
…On Thu, May 21, 2020, 2:36 PM Patrice Lopez ***@***.***> wrote:
@lucaspada894 <https://github.com/lucaspada894> In principle the server
does not crash for any of these kind of cases (it ran over 12M PDF without
any crashes and 44K is not a lot at all) - but it could come from a recent
update or over-loading the server without waiting when receiving a 503
response. Are you using Windows? how much memory and how many concurrent
queries? Which version of GROBID are you using? Can you provide the server
logs for the crashes? Optionally if you have a sharable problematic PDF for
that, it can help.
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Sorry for the delay,
I have included one of the error logs. The PDFs I included resulted in the
same error logs. I am calling the grobid service using the Java client you
provide to make best use of concurrency and as recommended on the grobid
website.
On Thu, May 21, 2020 at 2:39 PM Gian Spadafora ***@***.***> wrote:
Yes, I will send you the logs and PDFs in a few minutes.
On Thu, May 21, 2020, 2:36 PM Patrice Lopez ***@***.***>
wrote:
> @lucaspada894 <https://github.com/lucaspada894> In principle the server
> does not crash for any of these kind of cases (it ran over 12M PDF without
> any crashes and 44K is not a lot at all) - but it could come from a recent
> update or over-loading the server without waiting when receiving a 503
> response. Are you using Windows? how much memory and how many concurrent
> queries? Which version of GROBID are you using? Can you provide the server
> logs for the crashes? Optionally if you have a sharable problematic PDF for
> that, it can help.
>
> —
> You are receiving this because you were mentioned.
> Reply to this email directly, view it on GitHub
> <#577 (comment)>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/AIQAFKWTKRLWIVCDQALLUQTRSV7DLANCNFSM4MWZUKEA>
> .
>
```
INFO [2020-05-21 11:00:18,400] org.eclipse.jetty.setuid.SetUIDListener: Opened application@28e0e464{HTTP/1.1,[http/1.1]}{0.0.0.0:8070}
INFO [2020-05-21 11:00:18,400] org.eclipse.jetty.setuid.SetUIDListener: Opened admin@1d98daa0{HTTP/1.1,[http/1.1]}{0.0.0.0:8071}
INFO [2020-05-21 11:00:18,402] org.eclipse.jetty.server.Server: jetty-9.4.18.v20190429; built: 2019-04-29T20:42:08.989Z; git: e1bc35120a6617ee3df052294e433f3a25ce7097; jvm 1.8.0_202-release-1483-b03
WARN [2020-05-21 11:00:18,576] org.glassfish.jersey.internal.inject.Providers: A provider org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility registered in SERVER runtime does not implement any provider interfaces applicable in the SERVER runtime. Due to constraint configuration problems the provider org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility will be ignored.
INFO [2020-05-21 11:00:18,886] io.dropwizard.jersey.DropwizardResourceConfig: The following paths were found for the configured resources:
POST /api/annotatePDF (org.grobid.service.GrobidRestService)
POST /api/citationPatentAnnotations (org.grobid.service.GrobidRestService)
GET /api/grobid (org.grobid.service.GrobidRestService)
GET /api/health (org.grobid.service.resources.HealthResource)
GET /api/isalive (org.grobid.service.GrobidRestService)
POST /api/processAffiliations (org.grobid.service.GrobidRestService)
PUT /api/processAffiliations (org.grobid.service.GrobidRestService)
POST /api/processCitation (org.grobid.service.GrobidRestService)
PUT /api/processCitation (org.grobid.service.GrobidRestService)
POST /api/processCitationNames (org.grobid.service.GrobidRestService)
PUT /api/processCitationNames (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentPDF (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentST36 (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentTXT (org.grobid.service.GrobidRestService)
POST /api/processDate (org.grobid.service.GrobidRestService)
PUT /api/processDate (org.grobid.service.GrobidRestService)
POST /api/processFulltextAssetDocument (org.grobid.service.GrobidRestService)
PUT /api/processFulltextAssetDocument (org.grobid.service.GrobidRestService)
POST /api/processFulltextDocument (org.grobid.service.GrobidRestService)
PUT /api/processFulltextDocument (org.grobid.service.GrobidRestService)
POST /api/processHeaderDocument (org.grobid.service.GrobidRestService)
PUT /api/processHeaderDocument (org.grobid.service.GrobidRestService)
POST /api/processHeaderNames (org.grobid.service.GrobidRestService)
PUT /api/processHeaderNames (org.grobid.service.GrobidRestService)
POST /api/processReferences (org.grobid.service.GrobidRestService)
PUT /api/processReferences (org.grobid.service.GrobidRestService)
POST /api/referenceAnnotations (org.grobid.service.GrobidRestService)
GET /api/version (org.grobid.service.GrobidRestService)
INFO [2020-05-21 11:00:18,887] org.eclipse.jetty.server.handler.ContextHandler: Started i.d.j.MutableServletContextHandler@42d9e8d2{/,null,AVAILABLE}
INFO [2020-05-21 11:00:18,890] io.dropwizard.setup.AdminEnvironment: tasks =
POST /tasks/log-level (io.dropwizard.servlets.tasks.LogConfigurationTask)
POST /tasks/gc (io.dropwizard.servlets.tasks.GarbageCollectionTask)
INFO [2020-05-21 11:00:18,894] org.eclipse.jetty.server.handler.ContextHandler: Started i.d.j.MutableServletContextHandler@4d69d288{/,null,AVAILABLE}
INFO [2020-05-21 11:00:18,907] org.eclipse.jetty.server.AbstractConnector: Started application@28e0e464{HTTP/1.1,[http/1.1]}{0.0.0.0:8070}
INFO [2020-05-21 11:00:18,910] org.eclipse.jetty.server.AbstractConnector: Started admin@1d98daa0{HTTP/1.1,[http/1.1]}{0.0.0.0:8071}
INFO [2020-05-21 11:00:18,910] org.eclipse.jetty.server.Server: Started @2290ms
127.0.0.1 - - [21/May/2020:11:00:19 +0000] "GET /api/isalive HTTP/1.1" 200 4 "-" "Java/13.0.1" 70
21 May 2020 06:00.19 [INFO ] GrobidService - Cheking Grobid service...
21 May 2020 06:00.19 [INFO ] GrobidService - Grobid service is ok and can be used.
127.0.0.1 - - [21/May/2020:11:00:19 +0000] "GET /api/isalive HTTP/1.1" 200 4 "-" "Java/1.8.0_241" 1
27993 PDF files
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10023767.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10028170.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10024427.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10063534.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10037086.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10073413.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10073719.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10074948.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10074934.pdf
21 May 2020 06:00.19 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10076517.pdf
wait for thread completion
INFO [2020-05-21 11:00:19,765] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\affiliation-address\model.wapiti (size: 2699936)
INFO [2020-05-21 11:00:19,981] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\name\header\model.wapiti (size: 2225578)
INFO [2020-05-21 11:00:20,163] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\name\citation\model.wapiti (size: 440148)
INFO [2020-05-21 11:00:20,200] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\header\model.wapiti (size: 36094028)
INFO [2020-05-21 11:00:23,991] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\date\model.wapiti (size: 102435)
INFO [2020-05-21 11:00:24,000] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\citation\model.wapiti (size: 16412787)
INFO [2020-05-21 11:00:25,671] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\fulltext\model.wapiti (size: 22836546)
INFO [2020-05-21 11:00:27,864] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\segmentation\model.wapiti (size: 17807323)
INFO [2020-05-21 11:00:29,677] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\reference-segmenter\model.wapiti (size: 4921245)
INFO [2020-05-21 11:00:30,104] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\figure\model.wapiti (size: 422671)
INFO [2020-05-21 11:00:30,136] org.grobid.core.jni.WapitiModel: Loading model: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\table\model.wapiti (size: 1202011)
INFO [2020-05-21 11:00:30,234] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 1/10
INFO [2020-05-21 11:00:30,234] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 2/10
INFO [2020-05-21 11:00:30,235] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 3/10
INFO [2020-05-21 11:00:30,235] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 4/10
INFO [2020-05-21 11:00:30,235] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 5/10
INFO [2020-05-21 11:00:30,235] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 6/10
INFO [2020-05-21 11:00:30,235] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 7/10
INFO [2020-05-21 11:00:30,235] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 8/10
INFO [2020-05-21 11:00:30,235] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 9/10
INFO [2020-05-21 11:00:30,235] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
WARN [2020-05-21 11:00:31,432] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\language-detection\cybozu\profiles
WARN [2020-05-21 11:00:31,433] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\language-detection\cybozu\profiles
WARN [2020-05-21 11:00:31,435] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\language-detection\cybozu\profiles
WARN [2020-05-21 11:00:31,436] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\language-detection\cybozu\profiles
WARN [2020-05-21 11:00:31,438] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\language-detection\cybozu\profiles
WARN [2020-05-21 11:00:31,440] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\language-detection\cybozu\profiles
WARN [2020-05-21 11:00:31,441] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\language-detection\cybozu\profiles
21 May 2020 06:01.04 [INFO ] GrobidWorker - ..\PDF_FILES\10074934.pdf processed.
21 May 2020 06:01.04 [INFO ] GrobidWorker - pool-1-thread-8 End. :45152 ms
21 May 2020 06:01.04 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10084516.pdf
127.0.0.1 - - [21/May/2020:11:01:04 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 28282 "-" "Java/1.8.0_241" 45129
INFO [2020-05-21 11:01:04,581] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
21 May 2020 06:01.04 [INFO ] GrobidWorker - ..\PDF_FILES\10063534.pdf processed.
21 May 2020 06:01.04 [INFO ] GrobidWorker - pool-1-thread-5 End. :45527 ms
21 May 2020 06:01.04 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10192046.pdf
21 May 2020 06:01.04 [INFO ] GrobidWorker - ..\PDF_FILES\10076517.pdf processed.
21 May 2020 06:01.04 [INFO ] GrobidWorker - pool-1-thread-10 End. :45582 ms
21 May 2020 06:01.04 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10204695.pdf
127.0.0.1 - - [21/May/2020:11:01:04 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 53538 "-" "Java/1.8.0_241" 45191
INFO [2020-05-21 11:01:04,934] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
127.0.0.1 - - [21/May/2020:11:01:04 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 57660 "-" "Java/1.8.0_241" 45570
21 May 2020 06:01.05 [INFO ] GrobidWorker - ..\PDF_FILES\10073413.pdf processed.
21 May 2020 06:01.05 [INFO ] GrobidWorker - pool-1-thread-6 End. :45669 ms
21 May 2020 06:01.05 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10208228.pdf
INFO [2020-05-21 11:01:04,992] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
WARN [2020-05-21 11:01:05,010] org.grobid.core.utilities.matching.ReferenceMarkerMatcher: Cannot parse citation reference range: [(, Figs, ., , 4, -, 6, )]
127.0.0.1 - - [21/May/2020:11:01:05 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 53628 "-" "Java/1.8.0_241" 45335
21 May 2020 06:01.05 [INFO ] GrobidWorker - ..\PDF_FILES\10024427.pdf processed.
21 May 2020 06:01.05 [INFO ] GrobidWorker - pool-1-thread-2 End. :45721 ms
21 May 2020 06:01.05 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10229718.pdf
INFO [2020-05-21 11:01:05,082] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
127.0.0.1 - - [21/May/2020:11:01:05 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 42901 "-" "Java/1.8.0_241" 45389
21 May 2020 06:01.05 [INFO ] GrobidWorker - ..\PDF_FILES\10073719.pdf processed.
21 May 2020 06:01.05 [INFO ] GrobidWorker - pool-1-thread-7 End. :45849 ms
21 May 2020 06:01.05 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10233719.pdf
INFO [2020-05-21 11:01:05,168] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
127.0.0.1 - - [21/May/2020:11:01:05 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 61840 "-" "Java/1.8.0_241" 45832
INFO [2020-05-21 11:01:05,255] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
21 May 2020 06:01.05 [INFO ] GrobidWorker - ..\PDF_FILES\10028170.pdf processed.
21 May 2020 06:01.05 [INFO ] GrobidWorker - pool-1-thread-3 End. :46466 ms
21 May 2020 06:01.05 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\103154.pdf
127.0.0.1 - - [21/May/2020:11:01:05 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 77987 "-" "Java/1.8.0_241" 46128
INFO [2020-05-21 11:01:05,881] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
21 May 2020 06:01.06 [INFO ] GrobidWorker - ..\PDF_FILES\103154.pdf processed.
21 May 2020 06:01.06 [INFO ] GrobidWorker - pool-1-thread-3 End. :261 ms
21 May 2020 06:01.06 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10329144.pdf
WARN [2020-05-21 11:01:06,082] org.grobid.core.lang.impl.CybozuLanguageDetector: Cannot detect language because of: com.cybozu.labs.langdetect.LangDetectException: no features in text
WARN [2020-05-21 11:01:06,120] org.grobid.core.lang.impl.CybozuLanguageDetector: Cannot detect language because of: com.cybozu.labs.langdetect.LangDetectException: no features in text
127.0.0.1 - - [21/May/2020:11:01:06 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 2035 "-" "Java/1.8.0_241" 259
INFO [2020-05-21 11:01:06,144] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
21 May 2020 06:01.06 [INFO ] GrobidWorker - ..\PDF_FILES\10037086.pdf processed.
21 May 2020 06:01.06 [INFO ] GrobidWorker - pool-1-thread-4 End. :46983 ms
21 May 2020 06:01.06 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10329145.pdf
21 May 2020 06:01.06 [INFO ] GrobidWorker - ..\PDF_FILES\10074948.pdf processed.
21 May 2020 06:01.06 [INFO ] GrobidWorker - pool-1-thread-9 End. :47017 ms
21 May 2020 06:01.06 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10348097.pdf
127.0.0.1 - - [21/May/2020:11:01:06 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 92395 "-" "Java/1.8.0_241" 46649
INFO [2020-05-21 11:01:06,395] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
127.0.0.1 - - [21/May/2020:11:01:06 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 93905 "-" "Java/1.8.0_241" 46681
INFO [2020-05-21 11:01:06,421] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\affiliation-address\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\affiliation-address\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\name\header\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\name\header\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\name\citation\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\name\citation\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\header\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\header\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\date\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\date\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\citation\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\citation\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\fulltext\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\fulltext\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\segmentation\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\segmentation\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\reference-segmenter\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\reference-segmenter\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\figure\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\figure\model.wapiti
[Wapiti] Loading model: "D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\table\model.wapiti"
Model path: D:\Projects\pdf_to_boac_schema\lib\grobid\grobid-home\models\table\model.wapiti
***************************************ERROR PART**************************************************************
error: Cannot open input data buffer: Smith smith S Sm Smi Smit h th ith mith LINESTART INITCAP NODIGIT 0 1 1 1 1 1 0 0 0 0 0 0 0 0 NOPUNCT 0 0
AC ac A AC AC AC C AC AC AC LINEIN ALLCAP NODIGIT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NOPUNCT 0 0
, , , , , , , , , , LINEIN ALLCAP NODIGIT 1 0 0 0 0 0 0 0 0 0 0 0 0 0 COMMA 0 0
Boyd boyd B Bo Boy Boyd d yd oyd Boyd LINEIN INITCAP NODIGIT 0 1 0 1 1 1 0 0 0 0 0 0 0 0 NOPUNCT 0 0
MR mr M MR MR MR R MR MR MR LINEIN ALLCAP NODIGIT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NOPUNCT 0 0
. . . . . . . . . . LINEIN ALLCAP NODIGIT 1 0 0 0 0 0 0 0 0 0 0 0 0 0 DOT 1 0
Preferential preferential P Pr Pre Pref l al ial tial LINEIN INITCAP NODIGIT 0 0 1 0 0 0 0 0 0 0 0 0 0 0 NOPUNCT 1 0
effects effects e ef eff effe s ts cts ects LINEIN NOCAPS NODIGIT 0 0 1 0 0 0 0 0 0 0 0 0 0 0 NOPUNCT 1 0
of of o of of of f of of of LINEIN NOCAPS NODIGIT 0 0 1 0 0 1 0 0 0 0 0 0 0 0 NOPUNCT 1 0
1 1 1 1 1 1 1 1 1 1 LINEIN NOCAPS ALLDIGIT 1 0 0 0 0 1 0 0 0 0 0 0 0 0 NOPUNCT 2 0
, , , , , , , , , , LINEIN ALLCAP NODIGIT 1 0 0 0 0 0 0 0 0 0 0 0 0 0 COMMA 2 0
3 3 3 3 3 3 3 3 3 3 LINEIN NOCAPS ALLDIGIT 1 0 0 0 0 0 0 0 0 0 0 0 0 0 NOPUNCT 2 0
- - - - - - - - - - LINEIN ALLCAP NODIGIT 1 0 0 0 0 0 0 0 0 0 0 0 0 0 HYPHEN 2 0
bis bis b bi bis bis s is bis bis LINEIN NOCAPS NODIGIT 0 0 0 0 0 0 0 0 0 1 0 0 0 0 NOPUNCT 2 0
( ( ( ( ( ( ( ( ( ( LINEIN ALLCAP NODIGIT 1 0 0 0 0 0 0 0 0 1 0 0 0 0 OPENBRACKET 2 0
2 2 2 2 2 2 2 2 2 2 LINEIN NOCAPS ALLDIGIT 1 0 0 0 0 1 0 0 0 1 0 0 0 0 NOPUNCT 2 0
- - - - - - - - - - LINEIN ALLCAP NODIGIT 1 0 0 0 0 0 0 0 0 0 0 0 0 0 HYPHEN 3 0
chloro chloro c ch chl chlo o ro oro loro LINEIN NOCAPS NODIGIT 0 0 0 0 0 0 0 0 0 0 0 0 0 0 NOPUNCT 3 0
- - - - - - - - - - LINEIN ALLCAP NODIGIT 1 0 0 0 0 0 0 0 0 0 0 0 0 0 HYPHEN 3 0
ethyl ethyl e et eth ethy l yl hyl thyl LINEIN NOCAP
Task :grobid-service:run FAILED
FAILURE: Build failed with an exception.
* What went wrong:
Execution failed for task ':grobid-service:run'.
Process 'command 'C:\Program Files\Android\Android Studio\jre\bin\java.exe'' finished with non-zero exit value 1
```
|
OK, so you're using Windows. As you can see all the unresolved issues about windows, our recommendation would be to use a virtual machine with linux or run grobid on docker (https://grobid.readthedocs.io/en/latest/Grobid-docker/) |
macOS should not be a problem, right?
…On Thu, May 21, 2020 at 4:52 PM Luca Foppiano ***@***.***> wrote:
OK, so you're using Windows. As you can see all the unresolved issues
about windows, our recommendation would be to use a virtual machine with
linux or run grobid on docker (
https://grobid.readthedocs.io/en/latest/Grobid-docker/)
—
You are receiving this because you were mentioned.
Reply to this email directly, view it on GitHub
<#577 (comment)>,
or unsubscribe
<https://github.com/notifications/unsubscribe-auth/AIQAFKXHWP2FQ55GFQIRJX3RSWO77ANCNFSM4MWZUKEA>
.
|
no, it should not, if you are developing it's fine. It's what I'm using for development, anyway. However certain components behave slightly different (not at the same degrees of windows, though), so for batch processing and production environment, the main architecture is Linux. |
I will run it through Docker and let you know if the problem persists.
Thank you very much! And sorry for the inconvenience!
…On Thu, May 21, 2020 at 5:38 PM Luca Foppiano ***@***.***> wrote:
macOS should not be a problem, right?
no, it should not, if you are developing it's fine. It's what I'm using
for development, anyway.
However certain components behave slightly different (not at the same
degrees of windows, though), so for batch processing and production
environment, the main architecture is Linux.
—
You are receiving this because you were mentioned.
Reply to this email directly, view it on GitHub
<#577 (comment)>,
or unsubscribe
<https://github.com/notifications/unsubscribe-auth/AIQAFKSBCGDXRYQKAEK27L3RSWUN5ANCNFSM4MWZUKEA>
.
|
Hello again. I have run it through Docker. I am getting a new error log
which is attached to this email. I have set grobid-client.properties to
execute on port 8080 since I have changed to the Docker build. In
particular, I seem to get a 'connection refused' midway through processing.
Initially, the PDFs are processed just fine.
On Thu, May 21, 2020 at 6:08 PM Gian Spadafora ***@***.***> wrote:
I will run it through Docker and let you know if the problem persists.
Thank you very much! And sorry for the inconvenience!
On Thu, May 21, 2020 at 5:38 PM Luca Foppiano ***@***.***>
wrote:
> macOS should not be a problem, right?
>
> no, it should not, if you are developing it's fine. It's what I'm using
> for development, anyway.
>
> However certain components behave slightly different (not at the same
> degrees of windows, though), so for batch processing and production
> environment, the main architecture is Linux.
>
> —
> You are receiving this because you were mentioned.
> Reply to this email directly, view it on GitHub
> <#577 (comment)>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/AIQAFKSBCGDXRYQKAEK27L3RSWUN5ANCNFSM4MWZUKEA>
> .
>
"C:\Program Files\Java\jdk-13.0.1\bin\java.exe" -Dvisualvm.id=77656153892300 "-javaagent:C:\Program Files\JetBrains\IntelliJ IDEA 2019.2.4\lib\idea_rt.jar=63506:C:\Program Files\JetBrains\IntelliJ IDEA 2019.2.4\bin" -Dfile.encoding=UTF-8 -classpath D:\Projects\pdf_to_boac_schema\target\classes;C:\Users\Gian\.m2\repository\org\apache\maven\plugins\maven-compiler-plugin\3.8.1\maven-compiler-plugin-3.8.1.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-plugin-api\3.0\maven-plugin-api-3.0.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-model\3.0\maven-model-3.0.jar;C:\Users\Gian\.m2\repository\org\sonatype\sisu\sisu-inject-plexus\1.4.2\sisu-inject-plexus-1.4.2.jar;C:\Users\Gian\.m2\repository\org\sonatype\sisu\sisu-inject-bean\1.4.2\sisu-inject-bean-1.4.2.jar;C:\Users\Gian\.m2\repository\org\sonatype\sisu\sisu-guice\2.1.7\sisu-guice-2.1.7-noaop.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-artifact\3.0\maven-artifact-3.0.jar;C:\Users\Gian\.m2\repository\org\codehaus\plexus\plexus-utils\2.0.4\plexus-utils-2.0.4.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-core\3.0\maven-core-3.0.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-settings\3.0\maven-settings-3.0.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-settings-builder\3.0\maven-settings-builder-3.0.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-repository-metadata\3.0\maven-repository-metadata-3.0.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-model-builder\3.0\maven-model-builder-3.0.jar;C:\Users\Gian\.m2\repository\org\apache\maven\maven-aether-provider\3.0\maven-aether-provider-3.0.jar;C:\Users\Gian\.m2\repository\org\sonatype\aether\aether-impl\1.7\aether-impl-1.7.jar;C:\Users\Gian\.m2\repository\org\sonatype\aether\aether-spi\1.7\aether-spi-1.7.jar;C:\Users\Gian\.m2\repository\org\sonatype\aether\aether-api\1.7\aether-api-1.7.jar;C:\Users\Gian\.m2\repository\org\sonatype\aether\aether-util\1.7\aether-util-1.7.jar;C:\Users\Gian\.m2\repository\org\codehaus\plexus\plexus-interpolation\1.14\plexus-interpolation-1.14.jar;C:\Users\Gian\.m2\repository\org\codehaus\plexus\plexus-classworlds\2.2.3\plexus-classworlds-2.2.3.jar;C:\Users\Gian\.m2\repository\org\codehaus\plexus\plexus-component-annotations\1.5.5\plexus-component-annotations-1.5.5.jar;C:\Users\Gian\.m2\repository\org\sonatype\plexus\plexus-sec-dispatcher\1.3\plexus-sec-dispatcher-1.3.jar;C:\Users\Gian\.m2\repository\org\sonatype\plexus\plexus-cipher\1.4\plexus-cipher-1.4.jar;C:\Users\Gian\.m2\repository\org\apache\maven\shared\maven-shared-utils\3.2.1\maven-shared-utils-3.2.1.jar;C:\Users\Gian\.m2\repository\org\apache\maven\shared\maven-shared-incremental\1.1\maven-shared-incremental-1.1.jar;C:\Users\Gian\.m2\repository\org\codehaus\plexus\plexus-java\0.9.10\plexus-java-0.9.10.jar;C:\Users\Gian\.m2\repository\org\ow2\asm\asm\6.2\asm-6.2.jar;C:\Users\Gian\.m2\repository\com\thoughtworks\qdox\qdox\2.0-M8\qdox-2.0-M8.jar;C:\Users\Gian\.m2\repository\org\codehaus\plexus\plexus-compiler-api\2.8.4\plexus-compiler-api-2.8.4.jar;C:\Users\Gian\.m2\repository\org\codehaus\plexus\plexus-compiler-manager\2.8.4\plexus-compiler-manager-2.8.4.jar;C:\Users\Gian\.m2\repository\org\codehaus\plexus\plexus-compiler-javac\2.8.4\plexus-compiler-javac-2.8.4.jar;C:\Users\Gian\.m2\repository\org\json\json\20190722\json-20190722.jar;C:\Users\Gian\.m2\repository\com\fasterxml\jackson\core\jackson-databind\2.9.6\jackson-databind-2.9.6.jar;C:\Users\Gian\.m2\repository\com\fasterxml\jackson\dataformat\jackson-dataformat-xml\2.9.7\jackson-dataformat-xml-2.9.7.jar;C:\Users\Gian\.m2\repository\com\fasterxml\jackson\module\jackson-module-jaxb-annotations\2.9.7\jackson-module-jaxb-annotations-2.9.7.jar;C:\Users\Gian\.m2\repository\org\codehaus\woodstox\stax2-api\3.1.4\stax2-api-3.1.4.jar;C:\Users\Gian\.m2\repository\com\fasterxml\woodstox\woodstox-core\5.0.3\woodstox-core-5.0.3.jar;C:\Users\Gian\.m2\repository\xom\xom\1.2.5\xom-1.2.5.jar;C:\Users\Gian\.m2\repository\xml-apis\xml-apis\1.3.03\xml-apis-1.3.03.jar;C:\Users\Gian\.m2\repository\xerces\xercesImpl\2.8.0\xercesImpl-2.8.0.jar;C:\Users\Gian\.m2\repository\xalan\xalan\2.7.0\xalan-2.7.0.jar;C:\Users\Gian\.m2\repository\javax\xml\jaxp-api\1.4.2\jaxp-api-1.4.2.jar;C:\Users\Gian\.m2\repository\com\fasterxml\jackson\core\jackson-core\2.9.6\jackson-core-2.9.6.jar;C:\Users\Gian\.m2\repository\com\fasterxml\jackson\core\jackson-annotations\2.9.6\jackson-annotations-2.9.6.jar;C:\Users\Gian\.m2\repository\org\grobid\grobid-core\0.6.0\grobid-core-0.6.0.jar;C:\Users\Gian\.m2\repository\org\apache\commons\commons-text\1.8\commons-text-1.8.jar;C:\Users\Gian\.m2\repository\org\slf4j\slf4j-api\1.7.25\slf4j-api-1.7.25.jar;C:\Users\Gian\.m2\repository\com\cybozu\labs\langdetect\1.1-20120112\langdetect-1.1-20120112.jar;C:\Users\Gian\.m2\repository\com\rockymadden\stringmetric\stringmetric-core_2.10\0.27.3\stringmetric-core_2.10-0.27.3.jar;C:\Users\Gian\.m2\repository\org\scala-lang\scala-library\2.10.3\scala-library-2.10.3.jar;C:\Users\Gian\.m2\repository\commons-pool\commons-pool\1.6\commons-pool-1.6.jar;C:\Users\Gian\.m2\repository\commons-io\commons-io\2.5\commons-io-2.5.jar;C:\Users\Gian\.m2\repository\org\apache\commons\commons-lang3\3.6\commons-lang3-3.6.jar;C:\Users\Gian\.m2\repository\org\apache\commons\commons-collections4\4.1\commons-collections4-4.1.jar;C:\Users\Gian\.m2\repository\commons-dbutils\commons-dbutils\1.7\commons-dbutils-1.7.jar;C:\Users\Gian\.m2\repository\org\apache\httpcomponents\httpclient\4.5.3\httpclient-4.5.3.jar;C:\Users\Gian\.m2\repository\org\apache\httpcomponents\httpcore\4.4.6\httpcore-4.4.6.jar;C:\Users\Gian\.m2\repository\commons-logging\commons-logging\1.2\commons-logging-1.2.jar;C:\Users\Gian\.m2\repository\commons-codec\commons-codec\1.9\commons-codec-1.9.jar;C:\Users\Gian\.m2\repository\com\google\guava\guava\28.2-jre\guava-28.2-jre.jar;C:\Users\Gian\.m2\repository\com\google\guava\failureaccess\1.0.1\failureaccess-1.0.1.jar;C:\Users\Gian\.m2\repository\com\google\guava\listenablefuture\9999.0-empty-to-avoid-conflict-with-guava\listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar;C:\Users\Gian\.m2\repository\com\google\code\findbugs\jsr305\3.0.2\jsr305-3.0.2.jar;C:\Users\Gian\.m2\repository\org\checkerframework\checker-qual\2.10.0\checker-qual-2.10.0.jar;C:\Users\Gian\.m2\repository\com\google\errorprone\error_prone_annotations\2.3.4\error_prone_annotations-2.3.4.jar;C:\Users\Gian\.m2\repository\com\google\j2objc\j2objc-annotations\1.3\j2objc-annotations-1.3.jar;C:\Users\Gian\.m2\repository\net\arnx\jsonic\1.3.10\jsonic-1.3.10.jar;C:\Users\Gian\.m2\repository\org\apache\pdfbox\pdfbox\2.0.18\pdfbox-2.0.18.jar;C:\Users\Gian\.m2\repository\org\apache\pdfbox\fontbox\2.0.18\fontbox-2.0.18.jar;C:\Users\Gian\.m2\repository\net\sf\saxon\Saxon-HE\9.6.0-9\Saxon-HE-9.6.0-9.jar;C:\Users\Gian\.m2\repository\com\fasterxml\jackson\module\jackson-module-afterburner\2.10.1\jackson-module-afterburner-2.10.1.jar;C:\Users\Gian\.m2\repository\joda-time\joda-time\2.9.9\joda-time-2.9.9.jar;C:\Users\Gian\.m2\repository\org\apache\lucene\lucene-analyzers-common\4.5.1\lucene-analyzers-common-4.5.1.jar;C:\Users\Gian\.m2\repository\org\apache\lucene\lucene-core\4.5.1\lucene-core-4.5.1.jar;C:\Users\Gian\.m2\repository\javax\xml\bind\jaxb-api\2.3.0\jaxb-api-2.3.0.jar;C:\Users\Gian\.m2\repository\black\ninia\jep\3.8.2\jep-3.8.2.jar;C:\Users\Gian\.m2\repository\org\slf4j\slf4j-log4j12\1.7.25\slf4j-log4j12-1.7.25.jar;C:\Users\Gian\.m2\repository\log4j\log4j\1.2.17\log4j-1.2.17.jar;C:\Users\Gian\.m2\repository\org\slf4j\slf4j-jdk14\1.7.25\slf4j-jdk14-1.7.25.jar Main.main
22:50:46.161 [main] INFO org.grobid.service.main.GrobidServiceApplication - Configuration file: /opt/grobid/grobid-service/config/config.yaml
INFO [2020-05-22 22:50:50,586] io.dropwizard.server.DefaultServerFactory: Registering jersey handler with root path prefix: /
INFO [2020-05-22 22:50:50,597] io.dropwizard.server.DefaultServerFactory: Registering admin handler with root path prefix: /
INFO [2020-05-22 22:50:50,612] io.dropwizard.assets.AssetsBundle: Registering AssetBundle with name: grobidAssets for path /*
INFO [2020-05-22 22:50:51,818] com.hubspot.dropwizard.guicier.DropwizardModule: Added guice injected health check: org.grobid.service.resources.HealthResource
INFO [2020-05-22 22:50:51,848] org.grobid.service.GrobidRestService: Initiating Servlet GrobidRestService
INFO [2020-05-22 22:50:51,850] org.grobid.core.main.LibraryLoader: Loading external native sequence labelling library
INFO [2020-05-22 22:50:51,871] org.grobid.core.main.LibraryLoader: Loading Wapiti native library...
INFO [2020-05-22 22:50:51,884] org.grobid.core.main.LibraryLoader: Native library for sequence labelling loaded
INFO [2020-05-22 22:50:51,902] org.grobid.core.lexicon.Lexicon: Initiating dictionary
INFO [2020-05-22 22:50:51,904] org.grobid.core.lexicon.Lexicon: End of Initialization of dictionary
INFO [2020-05-22 22:50:51,912] org.grobid.core.lexicon.Lexicon: Initiating names
INFO [2020-05-22 22:50:51,916] org.grobid.core.lexicon.Lexicon: End of initialization of names
INFO [2020-05-22 22:50:53,514] org.grobid.core.lexicon.Lexicon: Initiating country codes
INFO [2020-05-22 22:50:53,516] org.grobid.core.lexicon.Lexicon: End of initialization of country codes
INFO [2020-05-22 22:50:54,094] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 1/10
INFO [2020-05-22 22:50:54,095] org.grobid.service.GrobidRestService: Initiating of Servlet GrobidRestService finished.
INFO [2020-05-22 22:50:54,126] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.resources.HealthResource as a root resource class
INFO [2020-05-22 22:50:54,128] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.GrobidRestService as a root resource class
INFO [2020-05-22 22:50:54,137] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidServiceExceptionMapper as a provider class
INFO [2020-05-22 22:50:54,140] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility as a provider class
INFO [2020-05-22 22:50:54,141] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidExceptionMapper as a provider class
INFO [2020-05-22 22:50:54,142] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.WebApplicationExceptionMapper as a provider class
INFO [2020-05-22 22:50:54,152] org.grobid.service.main.GrobidServiceApplication: Service config=GrobidServiceConfiguration{server=DefaultServerFactory{applicationConnectors=[io.dropwizard.jetty.HttpConnectorFactory@497570fb], adminConnectors=[io.dropwizard.jetty.HttpConnectorFactory@d71adc2], adminMaxThreads=64, adminMinThreads=1, applicationContextPath=/, adminContextPath=/}, logging=DefaultLoggingFactory{level=INFO, loggers={org.apache.pdfbox.pdmodel.font.PDSimpleFont="OFF"}, appenders=[io.dropwizard.logging.ConsoleAppenderFactory@6e57b5e9, io.dropwizard.logging.FileAppenderFactory@367b22e5]}, metrics=MetricsFactory{frequency=1 minute, reporters=[]}}
INFO [2020-05-22 22:50:54,212] io.dropwizard.server.ServerFactory: Starting grobid-service
…_______ _______ _______ ______ _________ ______ _______ _______ _______ _________ _______ _______
( ____ \( ____ )( ___ )( ___ \ \__ __/( __ \ ( ____ \( ____ \( ____ )|\ /|\__ __/( ____ \( ____ \
| ( \/| ( )|| ( ) || ( ) ) ) ( | ( \ ) | ( \/| ( \/| ( )|| ) ( | ) ( | ( \/| ( \/
| | | (____)|| | | || (__/ / | | | | ) | | (_____ | (__ | (____)|| | | | | | | | | (__
| | ____ | __)| | | || __ ( | | | | | | (_____ )| __) | __)( ( ) ) | | | | | __)
| | \_ )| (\ ( | | | || ( \ \ | | | | ) | ) || ( | (\ ( \ \_/ / | | | | | (
| (___) || ) \ \__| (___) || )___) )___) (___| (__/ ) /\____) || (____/\| ) \ \__ \ / ___) (___| (____/\| (____/\
(_______)|/ \__/(_______)|/ \___/ \_______/(______/ \_______)(_______/|/ \__/ \_/ \_______/(_______/(_______/
INFO [2020-05-22 22:50:54,633] org.eclipse.jetty.setuid.SetUIDListener: Opened application@6963b88c{HTTP/1.1,[http/1.1]}{0.0.0.0:8070}
INFO [2020-05-22 22:50:54,636] org.eclipse.jetty.setuid.SetUIDListener: Opened admin@ab24484{HTTP/1.1,[http/1.1]}{0.0.0.0:8071}
INFO [2020-05-22 22:50:54,648] org.eclipse.jetty.server.Server: jetty-9.4.11.v20180605; built: 2018-06-05T18:24:03.829Z; git: d5fc0523cfa96bfebfbda19606cad384d772f04c; jvm 1.8.0_212-b04
WARN [2020-05-22 22:50:55,448] org.glassfish.jersey.internal.inject.Providers: A provider org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility registered in SERVER runtime does not implement any provider interfaces applicable in the SERVER runtime. Due to constraint configuration problems the provider org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility will be ignored.
INFO [2020-05-22 22:50:55,740] io.dropwizard.jersey.DropwizardResourceConfig: The following paths were found for the configured resources:
POST /api/annotatePDF (org.grobid.service.GrobidRestService)
POST /api/citationPatentAnnotations (org.grobid.service.GrobidRestService)
GET /api/grobid (org.grobid.service.GrobidRestService)
GET /api/health (org.grobid.service.resources.HealthResource)
GET /api/isalive (org.grobid.service.GrobidRestService)
POST /api/processAffiliations (org.grobid.service.GrobidRestService)
PUT /api/processAffiliations (org.grobid.service.GrobidRestService)
POST /api/processCitation (org.grobid.service.GrobidRestService)
PUT /api/processCitation (org.grobid.service.GrobidRestService)
POST /api/processCitationNames (org.grobid.service.GrobidRestService)
PUT /api/processCitationNames (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentPDF (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentST36 (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentTXT (org.grobid.service.GrobidRestService)
POST /api/processDate (org.grobid.service.GrobidRestService)
PUT /api/processDate (org.grobid.service.GrobidRestService)
POST /api/processFulltextAssetDocument (org.grobid.service.GrobidRestService)
PUT /api/processFulltextAssetDocument (org.grobid.service.GrobidRestService)
POST /api/processFulltextDocument (org.grobid.service.GrobidRestService)
PUT /api/processFulltextDocument (org.grobid.service.GrobidRestService)
POST /api/processHeaderDocument (org.grobid.service.GrobidRestService)
PUT /api/processHeaderDocument (org.grobid.service.GrobidRestService)
POST /api/processHeaderNames (org.grobid.service.GrobidRestService)
PUT /api/processHeaderNames (org.grobid.service.GrobidRestService)
POST /api/processReferences (org.grobid.service.GrobidRestService)
PUT /api/processReferences (org.grobid.service.GrobidRestService)
POST /api/referenceAnnotations (org.grobid.service.GrobidRestService)
GET /api/version (org.grobid.service.GrobidRestService)
INFO [2020-05-22 22:50:55,745] org.eclipse.jetty.server.handler.ContextHandler: Started i.d.j.MutableServletContextHandler@5403907{/,null,AVAILABLE}
INFO [2020-05-22 22:50:55,749] io.dropwizard.setup.AdminEnvironment: tasks =
POST /tasks/log-level (io.dropwizard.servlets.tasks.LogConfigurationTask)
POST /tasks/gc (io.dropwizard.servlets.tasks.GarbageCollectionTask)
INFO [2020-05-22 22:50:55,752] org.eclipse.jetty.server.handler.ContextHandler: Started i.d.j.MutableServletContextHandler@621f23ac{/,null,AVAILABLE}
INFO [2020-05-22 22:50:55,760] org.eclipse.jetty.server.AbstractConnector: Started application@6963b88c{HTTP/1.1,[http/1.1]}{0.0.0.0:8070}
INFO [2020-05-22 22:50:55,762] org.eclipse.jetty.server.AbstractConnector: Started admin@ab24484{HTTP/1.1,[http/1.1]}{0.0.0.0:8071}
INFO [2020-05-22 22:50:55,762] org.eclipse.jetty.server.Server: Started @11025ms
172.17.0.1 - - [22/May/2020:22:50:56 +0000] "GET /api/isalive HTTP/1.1" 200 4 "-" "Java/13.0.1" 200
INFO [2020-05-22 22:50:56,235] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/affiliation-address/model.wapiti (size: 2700194)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/affiliation-address/model.wapiti"
Model path: /opt/grobid/grobid-home/models/affiliation-address/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/name/header/model.wapiti"
INFO [2020-05-22 22:50:56,422] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/name/header/model.wapiti (size: 2225578)
22 May 2020 17:50.56 [INFO ] GrobidService - Cheking Grobid service...
172.17.0.1 - - [22/May/2020:22:50:56 +0000] "GET /api/isalive HTTP/1.1" 200 4 "-" "Java/1.8.0_241" 1
22 May 2020 17:50.56 [INFO ] GrobidService - Grobid service is ok and can be used.
27993 PDF files
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10023767.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10063534.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10073413.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10024427.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10073719.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10028170.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10074934.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10037086.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10076517.pdf
22 May 2020 17:50.56 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10074948.pdf
wait for thread completion
Model path: /opt/grobid/grobid-home/models/name/header/model.wapiti
INFO [2020-05-22 22:50:56,722] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/name/citation/model.wapiti (size: 436519)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/name/citation/model.wapiti"
Model path: /opt/grobid/grobid-home/models/name/citation/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/header/model.wapiti"
INFO [2020-05-22 22:50:56,754] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/header/model.wapiti (size: 36094028)
Model path: /opt/grobid/grobid-home/models/header/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/date/model.wapiti"
INFO [2020-05-22 22:51:00,583] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/date/model.wapiti (size: 102435)
Model path: /opt/grobid/grobid-home/models/date/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/citation/model.wapiti"
INFO [2020-05-22 22:51:00,590] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/citation/model.wapiti (size: 16329542)
Model path: /opt/grobid/grobid-home/models/citation/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/fulltext/model.wapiti"
INFO [2020-05-22 22:51:02,350] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/fulltext/model.wapiti (size: 21112902)
Model path: /opt/grobid/grobid-home/models/fulltext/model.wapiti
INFO [2020-05-22 22:51:04,933] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/segmentation/model.wapiti (size: 16788068)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/segmentation/model.wapiti"
Model path: /opt/grobid/grobid-home/models/segmentation/model.wapiti
INFO [2020-05-22 22:51:06,959] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/reference-segmenter/model.wapiti (size: 4921245)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/reference-segmenter/model.wapiti"
Model path: /opt/grobid/grobid-home/models/reference-segmenter/model.wapiti
INFO [2020-05-22 22:51:07,580] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/figure/model.wapiti (size: 695735)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/figure/model.wapiti"
Model path: /opt/grobid/grobid-home/models/figure/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/table/model.wapiti"
INFO [2020-05-22 22:51:07,719] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/table/model.wapiti (size: 1364953)
Model path: /opt/grobid/grobid-home/models/table/model.wapiti
INFO [2020-05-22 22:51:07,825] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 1/10
INFO [2020-05-22 22:51:07,833] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 2/10
INFO [2020-05-22 22:51:07,836] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 3/10
INFO [2020-05-22 22:51:07,838] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 4/10
INFO [2020-05-22 22:51:07,839] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 5/10
INFO [2020-05-22 22:51:07,841] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 6/10
INFO [2020-05-22 22:51:07,842] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 7/10
INFO [2020-05-22 22:51:07,844] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 8/10
INFO [2020-05-22 22:51:07,873] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 9/10
INFO [2020-05-22 22:51:07,894] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
ERROR [2020-05-22 22:51:08,999] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
ERROR [2020-05-22 22:51:10,023] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
22 May 2020 17:51.10 [ERROR] GrobidService - Failed : HTTP error code : 503
172.17.0.1 - - [22/May/2020:22:51:10 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 14253
172.17.0.1 - - [22/May/2020:22:51:10 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 14925
ERROR [2020-05-22 22:51:11,053] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [22/May/2020:22:51:11 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 15215
ERROR [2020-05-22 22:51:13,303] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [22/May/2020:22:51:13 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 17455
ERROR [2020-05-22 22:51:14,306] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [22/May/2020:22:51:14 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 18452
ERROR [2020-05-22 22:51:15,313] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [22/May/2020:22:51:15 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 19460
ERROR [2020-05-22 22:51:21,039] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [22/May/2020:22:51:21 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 25192
ERROR [2020-05-22 22:51:22,048] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [22/May/2020:22:51:22 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 26233
WARN [2020-05-22 22:51:22,282] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-22 22:51:22,284] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-22 22:51:22,288] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-22 22:51:22,291] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-22 22:51:22,292] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-22 22:51:22,294] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-22 22:51:22,295] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
ERROR [2020-05-22 22:51:23,197] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [22/May/2020:22:51:23 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 27355
ERROR [2020-05-22 22:51:24,287] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [22/May/2020:22:51:24 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 28436
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10063534.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10028170.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-5 End. :29068 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-3 End. :29068 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10192046.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10084516.pdf
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10074948.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10023767.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-1 End. :29091 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-9 End. :29090 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10073719.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10076517.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-7 End. :29091 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10208228.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10024427.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10204695.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10074934.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-8 End. :29091 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-2 End. :29091 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10229718.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-10 End. :29091 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\103154.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10233719.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10329144.pdf
22 May 2020 17:51.25 [ERROR] GrobidService - Software caused connection abort: recv failed
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10037086.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-4 End. :29257 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10329145.pdf
22 May 2020 17:51.25 [ERROR] GrobidService - Software caused connection abort: recv failed
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10073413.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-6 End. :29258 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10348097.pdf
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10208228.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-9 End. :366 ms
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10356134.pdf
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10204695.pdf processed.
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10348097.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-6 End. :199 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10357212.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10192046.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10329144.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-10 End. :366 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10361725.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\103154.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-1 End. :366 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10362838.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10233719.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10329145.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-4 End. :201 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10365166.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-3 End. :389 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-8 End. :367 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10373368.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10368945.pdf
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-2 End. :369 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10378626.pdf
22 May 2020 17:51.25 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10084516.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-5 End. :415 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10384886.pdf
22 May 2020 17:51.25 [ERROR] GrobidService - Error writing to server
22 May 2020 17:51.25 [INFO ] GrobidWorker - ..\PDF_FILES\10229718.pdf processed.
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-7 End. :398 ms
22 May 2020 17:51.25 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10388554.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10378626.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 End. :63 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10384886.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10390629.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10373368.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 End. :41 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-8 End. :65 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10392722.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10392726.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10368945.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 End. :66 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10397660.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10365166.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 End. :70 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10403354.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10356134.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-9 End. :73 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10403671.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10361725.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 End. :72 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10405897.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10362838.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 End. :73 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10416375.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10357212.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-6 End. :75 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10416381.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10388554.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 End. :49 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10418876.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10403671.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-9 End. :79 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10418901.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10405897.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 End. :80 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10425240.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10403354.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 End. :82 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10426207.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10416381.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-6 End. :83 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10426212.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10392722.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 End. :92 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10390629.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 End. :92 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10432280.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10430622.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10416375.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 End. :85 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10418876.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10438601.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 End. :78 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10392726.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-8 End. :93 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10443789.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10397660.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10443529.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 End. :92 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10458992.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10432280.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10418901.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 End. :64 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-9 End. :72 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10460831.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10460833.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10426207.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 End. :69 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10475084.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10458992.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 End. :63 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10481737.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10426212.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-6 End. :66 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10488727.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10443529.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 End. :66 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10498029.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10438601.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 End. :66 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10425240.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10500282.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 End. :73 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10503775.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10443789.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-8 End. :70 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10430622.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10507310.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 End. :72 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10507327.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10475084.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 End. :59 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10507362.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10481737.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 End. :68 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10515281.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10507327.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 End. :61 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10515282.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10488727.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-6 End. :68 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-6 Start. Processing = ..\PDF_FILES\10515283.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10507310.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-8 End. :62 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-8 Start. Processing = ..\PDF_FILES\10515284.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10460831.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 End. :70 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10517924.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10460833.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-9 End. :71 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-9 Start. Processing = ..\PDF_FILES\10518694.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10500282.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 End. :71 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10518710.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [ERROR] GrobidService - Unexpected end of file from server
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10498029.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 End. :72 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10503775.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10522785.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 End. :72 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10541018.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Connection reset
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10507362.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 End. :57 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-4 Start. Processing = ..\PDF_FILES\10544100.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Connection reset
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10518710.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 End. :43 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-1 Start. Processing = ..\PDF_FILES\10544119.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Connection reset
22 May 2020 17:51.26 [ERROR] GrobidService - Connection reset
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10541018.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 End. :44 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10522785.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 End. :62 ms
22 May 2020 17:51.26 [ERROR] GrobidService - Unrecognized Windows Sockets error: 0: recv failed
22 May 2020 17:51.26 [ERROR] GrobidService - Unrecognized Windows Sockets error: 0: recv failed
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-10 Start. Processing = ..\PDF_FILES\10547254.pdf
22 May 2020 17:51.26 [ERROR] GrobidService - Connection reset
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-7 Start. Processing = ..\PDF_FILES\10550676.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10515282.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 End. :68 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-5 Start. Processing = ..\PDF_FILES\10562501.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10515281.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 End. :68 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-3 Start. Processing = ..\PDF_FILES\10573552.pdf
22 May 2020 17:51.26 [INFO ] GrobidWorker - ..\PDF_FILES\10517924.pdf processed.
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 End. :67 ms
22 May 2020 17:51.26 [INFO ] GrobidWorker - pool-1-thread-2 Start. Processing = ..\PDF_FILES\10573809.pdf
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
22 May 2020 17:51.28 [ERROR] GrobidService - Connection refused: connect
Process finished with exit code -1
|
@lucaspada894 I'm trying to reproduce your problem, did you use the grobid-client-python to process your files? |
No, I used the grobid-client-java to process the files.
…On Sat, May 23, 2020 at 12:41 AM Luca Foppiano ***@***.***> wrote:
@lucaspada894 <https://github.com/lucaspada894> I'm trying to reproduce
your problem, did you use the grobid-client-python to process your files?
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|
OK, when you get connection refused, it's when the docker container is killed. This can happen when the allocated memory is not enough. However, I had it set to 4.5Gb and still got the problem. Grobid should work fine with 4 Gb but, well, let's see if we can make it run first ;-) |
Okay, also, here is a different log for when I use the line "docker run -t
--rm --init -p 8080:8070 -p 8081:8071 lfoppiano/grobid:0.5.6". The error in
particular seems to be "Could not get an engine from the pool within
configured time. Sending service unavailable."
…On Sat, May 23, 2020 at 1:26 AM Luca Foppiano ***@***.***> wrote:
OK, when you get connection refused, it's when the docker container is
killed. This can happen when the allocated memory is not enough. However, I
had it set to 4.5Gb and still got the problem.
Could you try to increase the memory allocated to your docker server to,
let's say 6 or 8 Gb?
Grobid should work fine with 4 Gb but, well, let's see if we can make it
run first ;-)
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|
Oops, forgot to attach it.
On Sat, May 23, 2020 at 1:59 AM Gian Spadafora ***@***.***> wrote:
Okay, also, here is a different log for when I use the line "docker run -t
--rm --init -p 8080:8070 -p 8081:8071 lfoppiano/grobid:0.5.6". The error in
particular seems to be "Could not get an engine from the pool within
configured time. Sending service unavailable."
On Sat, May 23, 2020 at 1:26 AM Luca Foppiano ***@***.***>
wrote:
> OK, when you get connection refused, it's when the docker container is
> killed. This can happen when the allocated memory is not enough. However, I
> had it set to 4.5Gb and still got the problem.
> Could you try to increase the memory allocated to your docker server to,
> let's say 6 or 8 Gb?
>
> Grobid should work fine with 4 Gb but, well, let's see if we can make it
> run first ;-)
>
> —
> You are receiving this because you were mentioned.
> Reply to this email directly, view it on GitHub
> <#577 (comment)>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/AIQAFKRDRAYRHFNIWVRNBOLRS5UARANCNFSM4MWZUKEA>
> .
>
Microsoft Windows [Version 10.0.18362.836]
(c) 2019 Microsoft Corporation. All rights reserved.
C:\Users\Gian>docker run -t --rm --init -p 8080:8070 -p 8081:8071 lfoppiano/grobid:0.5.6
06:53:51.515 [main] INFO org.grobid.service.main.GrobidServiceApplication - Configuration file: /opt/grobid/grobid-service/config/config.yaml
INFO [2020-05-23 06:53:53,792] io.dropwizard.server.DefaultServerFactory: Registering jersey handler with root path prefix: /
INFO [2020-05-23 06:53:53,795] io.dropwizard.server.DefaultServerFactory: Registering admin handler with root path prefix: /
INFO [2020-05-23 06:53:53,797] io.dropwizard.assets.AssetsBundle: Registering AssetBundle with name: grobidAssets for path /*
INFO [2020-05-23 06:53:54,475] com.hubspot.dropwizard.guicier.DropwizardModule: Added guice injected health check: org.grobid.service.resources.HealthResource
INFO [2020-05-23 06:53:54,492] org.grobid.service.GrobidRestService: Initiating Servlet GrobidRestService
INFO [2020-05-23 06:53:54,498] org.grobid.core.main.LibraryLoader: Loading external native sequence labelling library
INFO [2020-05-23 06:53:54,502] org.grobid.core.main.LibraryLoader: Loading Wapiti native library...
INFO [2020-05-23 06:53:54,525] org.grobid.core.main.LibraryLoader: Native library for sequence labelling loaded
INFO [2020-05-23 06:53:54,532] org.grobid.core.lexicon.Lexicon: Initiating dictionary
INFO [2020-05-23 06:53:54,533] org.grobid.core.lexicon.Lexicon: End of Initialization of dictionary
INFO [2020-05-23 06:53:54,534] org.grobid.core.lexicon.Lexicon: Initiating names
INFO [2020-05-23 06:53:54,535] org.grobid.core.lexicon.Lexicon: End of initialization of names
INFO [2020-05-23 06:53:55,029] org.grobid.core.lexicon.Lexicon: Initiating country codes
INFO [2020-05-23 06:53:55,029] org.grobid.core.lexicon.Lexicon: End of initialization of country codes
INFO [2020-05-23 06:53:55,186] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 1/10INFO [2020-05-23 06:53:55,186] org.grobid.service.GrobidRestService: Initiating of Servlet GrobidRestService finished.
INFO [2020-05-23 06:53:55,202] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.resources.HealthResource as a root resource class
INFO [2020-05-23 06:53:55,202] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.GrobidRestService as a root resource class
INFO [2020-05-23 06:53:55,206] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidServiceExceptionMapper as a provider class
INFO [2020-05-23 06:53:55,207] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility as a provider class
INFO [2020-05-23 06:53:55,207] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidExceptionMapper as a provider class
INFO [2020-05-23 06:53:55,207] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.WebApplicationExceptionMapper as a provider class
INFO [2020-05-23 06:53:55,211] org.grobid.service.main.GrobidServiceApplication: Service config=GrobidServiceConfiguration{server=DefaultServerFactory{applicationConnectors=[io.dropwizard.jetty.HttpConnectorFactory@497570fb], adminConnectors=[io.dropwizard.jetty.HttpConnectorFactory@d71adc2], adminMaxThreads=64, adminMinThreads=1, applicationContextPath=/, adminContextPath=/}, logging=DefaultLoggingFactory{level=INFO, loggers={org.apache.pdfbox.pdmodel.font.PDSimpleFont="OFF"}, appenders=[io.dropwizard.logging.ConsoleAppenderFactory@6e57b5e9, io.dropwizard.logging.FileAppenderFactory@367b22e5]}, metrics=MetricsFactory{frequency=1 minute, reporters=[]}}
INFO [2020-05-23 06:53:55,232] io.dropwizard.server.ServerFactory: Starting grobid-service
…_______ _______ _______ ______ _________ ______ _______ _______ _______ _________ _______ _______
( ____ \( ____ )( ___ )( ___ \ \__ __/( __ \ ( ____ \( ____ \( ____ )|\ /|\__ __/( ____ \( ____ \
| ( \/| ( )|| ( ) || ( ) ) ) ( | ( \ ) | ( \/| ( \/| ( )|| ) ( | ) ( | ( \/| ( \/
| | | (____)|| | | || (__/ / | | | | ) | | (_____ | (__ | (____)|| | | | | | | | | (__
| | ____ | __)| | | || __ ( | | | | | | (_____ )| __) | __)( ( ) ) | | | | | __)
| | \_ )| (\ ( | | | || ( \ \ | | | | ) | ) || ( | (\ ( \ \_/ / | | | | | (
| (___) || ) \ \__| (___) || )___) )___) (___| (__/ ) /\____) || (____/\| ) \ \__ \ / ___) (___| (____/\| (____/\
(_______)|/ \__/(_______)|/ \___/ \_______/(______/ \_______)(_______/|/ \__/ \_/ \_______/(_______/(_______/
INFO [2020-05-23 06:53:55,423] org.eclipse.jetty.setuid.SetUIDListener: Opened application@6963b88c{HTTP/1.1,[http/1.1]}{0.0.0.0:8070}
INFO [2020-05-23 06:53:55,423] org.eclipse.jetty.setuid.SetUIDListener: Opened admin@ab24484{HTTP/1.1,[http/1.1]}{0.0.0.0:8071}
INFO [2020-05-23 06:53:55,428] org.eclipse.jetty.server.Server: jetty-9.4.11.v20180605; built: 2018-06-05T18:24:03.829Z; git: d5fc0523cfa96bfebfbda19606cad384d772f04c; jvm 1.8.0_212-b04
WARN [2020-05-23 06:53:56,179] org.glassfish.jersey.internal.inject.Providers: A provider org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility registered in SERVER runtime does not implement any provider interfaces applicable in the SERVER runtime. Due to constraint configuration problems the provider org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility will be ignored.
INFO [2020-05-23 06:53:56,554] io.dropwizard.jersey.DropwizardResourceConfig: The following paths were found for the configured resources:
POST /api/annotatePDF (org.grobid.service.GrobidRestService)
POST /api/citationPatentAnnotations (org.grobid.service.GrobidRestService)
GET /api/grobid (org.grobid.service.GrobidRestService)
GET /api/health (org.grobid.service.resources.HealthResource)
GET /api/isalive (org.grobid.service.GrobidRestService)
POST /api/processAffiliations (org.grobid.service.GrobidRestService)
PUT /api/processAffiliations (org.grobid.service.GrobidRestService)
POST /api/processCitation (org.grobid.service.GrobidRestService)
PUT /api/processCitation (org.grobid.service.GrobidRestService)
POST /api/processCitationNames (org.grobid.service.GrobidRestService)
PUT /api/processCitationNames (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentPDF (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentST36 (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentTXT (org.grobid.service.GrobidRestService)
POST /api/processDate (org.grobid.service.GrobidRestService)
PUT /api/processDate (org.grobid.service.GrobidRestService)
POST /api/processFulltextAssetDocument (org.grobid.service.GrobidRestService)
PUT /api/processFulltextAssetDocument (org.grobid.service.GrobidRestService)
POST /api/processFulltextDocument (org.grobid.service.GrobidRestService)
PUT /api/processFulltextDocument (org.grobid.service.GrobidRestService)
POST /api/processHeaderDocument (org.grobid.service.GrobidRestService)
PUT /api/processHeaderDocument (org.grobid.service.GrobidRestService)
POST /api/processHeaderNames (org.grobid.service.GrobidRestService)
PUT /api/processHeaderNames (org.grobid.service.GrobidRestService)
POST /api/processReferences (org.grobid.service.GrobidRestService)
PUT /api/processReferences (org.grobid.service.GrobidRestService)
POST /api/referenceAnnotations (org.grobid.service.GrobidRestService)
GET /api/version (org.grobid.service.GrobidRestService)
INFO [2020-05-23 06:53:56,568] org.eclipse.jetty.server.handler.ContextHandler: Started i.d.j.MutableServletContextHandler@5403907{/,null,AVAILABLE}
INFO [2020-05-23 06:53:56,573] io.dropwizard.setup.AdminEnvironment: tasks =
POST /tasks/log-level (io.dropwizard.servlets.tasks.LogConfigurationTask)
POST /tasks/gc (io.dropwizard.servlets.tasks.GarbageCollectionTask)
INFO [2020-05-23 06:53:56,581] org.eclipse.jetty.server.handler.ContextHandler: Started i.d.j.MutableServletContextHandler@621f23ac{/,null,AVAILABLE}
INFO [2020-05-23 06:53:56,608] org.eclipse.jetty.server.AbstractConnector: Started application@6963b88c{HTTP/1.1,[http/1.1]}{0.0.0.0:8070}
INFO [2020-05-23 06:53:56,609] org.eclipse.jetty.server.AbstractConnector: Started admin@ab24484{HTTP/1.1,[http/1.1]}{0.0.0.0:8071}
INFO [2020-05-23 06:53:56,609] org.eclipse.jetty.server.Server: Started @6148ms
INFO [2020-05-23 06:54:01,338] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/affiliation-address/model.wapiti (size: 2700194)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/affiliation-address/model.wapiti"
Model path: /opt/grobid/grobid-home/models/affiliation-address/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/name/header/model.wapiti"
INFO [2020-05-23 06:54:01,589] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/name/header/model.wapiti (size: 2225578)
Model path: /opt/grobid/grobid-home/models/name/header/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/name/citation/model.wapiti"
INFO [2020-05-23 06:54:01,792] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/name/citation/model.wapiti (size: 436519)
Model path: /opt/grobid/grobid-home/models/name/citation/model.wapiti
INFO [2020-05-23 06:54:01,833] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/header/model.wapiti (size: 36094028)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/header/model.wapiti"
Model path: /opt/grobid/grobid-home/models/header/model.wapiti
INFO [2020-05-23 06:54:07,181] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/date/model.wapiti (size: 102435)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/date/model.wapiti"
Model path: /opt/grobid/grobid-home/models/date/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/citation/model.wapiti"
INFO [2020-05-23 06:54:07,197] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/citation/model.wapiti (size: 16329542)
Model path: /opt/grobid/grobid-home/models/citation/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/fulltext/model.wapiti"
INFO [2020-05-23 06:54:09,300] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/fulltext/model.wapiti (size: 21112902)
Model path: /opt/grobid/grobid-home/models/fulltext/model.wapiti
INFO [2020-05-23 06:54:12,183] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/segmentation/model.wapiti (size: 16788068)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/segmentation/model.wapiti"
Model path: /opt/grobid/grobid-home/models/segmentation/model.wapiti
INFO [2020-05-23 06:54:15,049] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/reference-segmenter/model.wapiti (size: 4921245)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/reference-segmenter/model.wapiti"
Model path: /opt/grobid/grobid-home/models/reference-segmenter/model.wapiti
INFO [2020-05-23 06:54:15,633] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/figure/model.wapiti (size: 695735)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/figure/model.wapiti"
Model path: /opt/grobid/grobid-home/models/figure/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/table/model.wapiti"
INFO [2020-05-23 06:54:15,698] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/table/model.wapiti (size: 1364953)
Model path: /opt/grobid/grobid-home/models/table/model.wapiti
INFO [2020-05-23 06:54:15,822] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 1/10INFO [2020-05-23 06:54:15,924] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 2/10INFO [2020-05-23 06:54:15,934] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 3/10INFO [2020-05-23 06:54:15,947] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 4/10INFO [2020-05-23 06:54:15,949] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 5/10INFO [2020-05-23 06:54:15,967] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 6/10INFO [2020-05-23 06:54:15,974] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 7/10INFO [2020-05-23 06:54:15,977] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 8/10INFO [2020-05-23 06:54:15,997] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 9/10INFO [2020-05-23 06:54:16,020] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
ERROR [2020-05-23 06:54:17,075] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
ERROR [2020-05-23 06:54:18,099] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
ERROR [2020-05-23 06:54:19,141] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
ERROR [2020-05-23 06:54:21,358] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:22 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 21122
172.17.0.1 - - [23/May/2020:06:54:22 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 21755
172.17.0.1 - - [23/May/2020:06:54:22 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 21756
172.17.0.1 - - [23/May/2020:06:54:22 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 21618
ERROR [2020-05-23 06:54:22,392] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:22 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 22113
ERROR [2020-05-23 06:54:23,408] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:23 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 23123
ERROR [2020-05-23 06:54:24,415] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:24 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 24084
ERROR [2020-05-23 06:54:30,698] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:30 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 29692
WARN [2020-05-23 06:54:31,736] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-23 06:54:31,740] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-23 06:54:31,740] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-23 06:54:31,758] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
ERROR [2020-05-23 06:54:31,768] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:31 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 31491
WARN [2020-05-23 06:54:31,798] org.grobid.core.lang.impl.CybozuLanguageDetector: Cannot detect language because of: com.cybozu.labs.langdetect.LangDetectException: no features in text
WARN [2020-05-23 06:54:31,827] org.grobid.core.lang.impl.CybozuLanguageDetector: Cannot detect language because of: com.cybozu.labs.langdetect.LangDetectException: no features in text
INFO [2020-05-23 06:54:31,923] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
172.17.0.1 - - [23/May/2020:06:54:32 +0000] "POST /api/processFulltextDocument HTTP/1.1" 200 1187 "-" "Java/1.8.0_241" 31656
ERROR [2020-05-23 06:54:33,119] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:33 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 2329
ERROR [2020-05-23 06:54:34,119] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:34 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 3309
ERROR [2020-05-23 06:54:35,120] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:54:35 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 4336
C:\Users\Gian>docker run -t --rm --init -p 8080:8070 -p 8081:8071 lfoppiano/grobid:0.5.6
06:55:59.669 [main] INFO org.grobid.service.main.GrobidServiceApplication - Configuration file: /opt/grobid/grobid-service/config/config.yaml
INFO [2020-05-23 06:56:02,760] io.dropwizard.server.DefaultServerFactory: Registering jersey handler with root path prefix: /
INFO [2020-05-23 06:56:02,792] io.dropwizard.server.DefaultServerFactory: Registering admin handler with root path prefix: /
INFO [2020-05-23 06:56:02,793] io.dropwizard.assets.AssetsBundle: Registering AssetBundle with name: grobidAssets for path /*
INFO [2020-05-23 06:56:03,476] com.hubspot.dropwizard.guicier.DropwizardModule: Added guice injected health check: org.grobid.service.resources.HealthResource
INFO [2020-05-23 06:56:03,488] org.grobid.service.GrobidRestService: Initiating Servlet GrobidRestService
INFO [2020-05-23 06:56:03,489] org.grobid.core.main.LibraryLoader: Loading external native sequence labelling library
INFO [2020-05-23 06:56:03,491] org.grobid.core.main.LibraryLoader: Loading Wapiti native library...
INFO [2020-05-23 06:56:03,501] org.grobid.core.main.LibraryLoader: Native library for sequence labelling loaded
INFO [2020-05-23 06:56:03,504] org.grobid.core.lexicon.Lexicon: Initiating dictionary
INFO [2020-05-23 06:56:03,504] org.grobid.core.lexicon.Lexicon: End of Initialization of dictionary
INFO [2020-05-23 06:56:03,505] org.grobid.core.lexicon.Lexicon: Initiating names
INFO [2020-05-23 06:56:03,505] org.grobid.core.lexicon.Lexicon: End of initialization of names
INFO [2020-05-23 06:56:04,068] org.grobid.core.lexicon.Lexicon: Initiating country codes
INFO [2020-05-23 06:56:04,068] org.grobid.core.lexicon.Lexicon: End of initialization of country codes
INFO [2020-05-23 06:56:04,458] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 1/10INFO [2020-05-23 06:56:04,458] org.grobid.service.GrobidRestService: Initiating of Servlet GrobidRestService finished.
INFO [2020-05-23 06:56:04,464] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.resources.HealthResource as a root resource class
INFO [2020-05-23 06:56:04,464] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.GrobidRestService as a root resource class
INFO [2020-05-23 06:56:04,465] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidServiceExceptionMapper as a provider class
INFO [2020-05-23 06:56:04,465] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility as a provider class
INFO [2020-05-23 06:56:04,466] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.GrobidExceptionMapper as a provider class
INFO [2020-05-23 06:56:04,466] com.hubspot.dropwizard.guicier.DropwizardModule: Registering org.grobid.service.exceptions.mapper.WebApplicationExceptionMapper as a provider class
INFO [2020-05-23 06:56:04,469] org.grobid.service.main.GrobidServiceApplication: Service config=GrobidServiceConfiguration{server=DefaultServerFactory{applicationConnectors=[io.dropwizard.jetty.HttpConnectorFactory@497570fb], adminConnectors=[io.dropwizard.jetty.HttpConnectorFactory@d71adc2], adminMaxThreads=64, adminMinThreads=1, applicationContextPath=/, adminContextPath=/}, logging=DefaultLoggingFactory{level=INFO, loggers={org.apache.pdfbox.pdmodel.font.PDSimpleFont="OFF"}, appenders=[io.dropwizard.logging.ConsoleAppenderFactory@6e57b5e9, io.dropwizard.logging.FileAppenderFactory@367b22e5]}, metrics=MetricsFactory{frequency=1 minute, reporters=[]}}
INFO [2020-05-23 06:56:04,524] io.dropwizard.server.ServerFactory: Starting grobid-service
_______ _______ _______ ______ _________ ______ _______ _______ _______ _________ _______ _______
( ____ \( ____ )( ___ )( ___ \ \__ __/( __ \ ( ____ \( ____ \( ____ )|\ /|\__ __/( ____ \( ____ \
| ( \/| ( )|| ( ) || ( ) ) ) ( | ( \ ) | ( \/| ( \/| ( )|| ) ( | ) ( | ( \/| ( \/
| | | (____)|| | | || (__/ / | | | | ) | | (_____ | (__ | (____)|| | | | | | | | | (__
| | ____ | __)| | | || __ ( | | | | | | (_____ )| __) | __)( ( ) ) | | | | | __)
| | \_ )| (\ ( | | | || ( \ \ | | | | ) | ) || ( | (\ ( \ \_/ / | | | | | (
| (___) || ) \ \__| (___) || )___) )___) (___| (__/ ) /\____) || (____/\| ) \ \__ \ / ___) (___| (____/\| (____/\
(_______)|/ \__/(_______)|/ \___/ \_______/(______/ \_______)(_______/|/ \__/ \_/ \_______/(_______/(_______/
INFO [2020-05-23 06:56:04,827] org.eclipse.jetty.setuid.SetUIDListener: Opened application@6963b88c{HTTP/1.1,[http/1.1]}{0.0.0.0:8070}
INFO [2020-05-23 06:56:04,828] org.eclipse.jetty.setuid.SetUIDListener: Opened admin@ab24484{HTTP/1.1,[http/1.1]}{0.0.0.0:8071}
INFO [2020-05-23 06:56:04,831] org.eclipse.jetty.server.Server: jetty-9.4.11.v20180605; built: 2018-06-05T18:24:03.829Z; git: d5fc0523cfa96bfebfbda19606cad384d772f04c; jvm 1.8.0_212-b04
WARN [2020-05-23 06:56:05,230] org.glassfish.jersey.internal.inject.Providers: A provider org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility registered in SERVER runtime does not implement any provider interfaces applicable in the SERVER runtime. Due to constraint configuration problems the provider org.grobid.service.exceptions.mapper.GrobidExceptionsTranslationUtility will be ignored.
INFO [2020-05-23 06:56:05,671] io.dropwizard.jersey.DropwizardResourceConfig: The following paths were found for the configured resources:
POST /api/annotatePDF (org.grobid.service.GrobidRestService)
POST /api/citationPatentAnnotations (org.grobid.service.GrobidRestService)
GET /api/grobid (org.grobid.service.GrobidRestService)
GET /api/health (org.grobid.service.resources.HealthResource)
GET /api/isalive (org.grobid.service.GrobidRestService)
POST /api/processAffiliations (org.grobid.service.GrobidRestService)
PUT /api/processAffiliations (org.grobid.service.GrobidRestService)
POST /api/processCitation (org.grobid.service.GrobidRestService)
PUT /api/processCitation (org.grobid.service.GrobidRestService)
POST /api/processCitationNames (org.grobid.service.GrobidRestService)
PUT /api/processCitationNames (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentPDF (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentST36 (org.grobid.service.GrobidRestService)
POST /api/processCitationPatentTXT (org.grobid.service.GrobidRestService)
POST /api/processDate (org.grobid.service.GrobidRestService)
PUT /api/processDate (org.grobid.service.GrobidRestService)
POST /api/processFulltextAssetDocument (org.grobid.service.GrobidRestService)
PUT /api/processFulltextAssetDocument (org.grobid.service.GrobidRestService)
POST /api/processFulltextDocument (org.grobid.service.GrobidRestService)
PUT /api/processFulltextDocument (org.grobid.service.GrobidRestService)
POST /api/processHeaderDocument (org.grobid.service.GrobidRestService)
PUT /api/processHeaderDocument (org.grobid.service.GrobidRestService)
POST /api/processHeaderNames (org.grobid.service.GrobidRestService)
PUT /api/processHeaderNames (org.grobid.service.GrobidRestService)
POST /api/processReferences (org.grobid.service.GrobidRestService)
PUT /api/processReferences (org.grobid.service.GrobidRestService)
POST /api/referenceAnnotations (org.grobid.service.GrobidRestService)
GET /api/version (org.grobid.service.GrobidRestService)
INFO [2020-05-23 06:56:05,682] org.eclipse.jetty.server.handler.ContextHandler: Started i.d.j.MutableServletContextHandler@5403907{/,null,AVAILABLE}
INFO [2020-05-23 06:56:05,688] io.dropwizard.setup.AdminEnvironment: tasks =
POST /tasks/log-level (io.dropwizard.servlets.tasks.LogConfigurationTask)
POST /tasks/gc (io.dropwizard.servlets.tasks.GarbageCollectionTask)
INFO [2020-05-23 06:56:05,692] org.eclipse.jetty.server.handler.ContextHandler: Started i.d.j.MutableServletContextHandler@621f23ac{/,null,AVAILABLE}
INFO [2020-05-23 06:56:05,707] org.eclipse.jetty.server.AbstractConnector: Started application@6963b88c{HTTP/1.1,[http/1.1]}{0.0.0.0:8070}
INFO [2020-05-23 06:56:05,708] org.eclipse.jetty.server.AbstractConnector: Started admin@ab24484{HTTP/1.1,[http/1.1]}{0.0.0.0:8071}
INFO [2020-05-23 06:56:05,708] org.eclipse.jetty.server.Server: Started @7659ms
INFO [2020-05-23 06:56:06,929] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/affiliation-address/model.wapiti (size: 2700194)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/affiliation-address/model.wapiti"
Model path: /opt/grobid/grobid-home/models/affiliation-address/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/name/header/model.wapiti"
INFO [2020-05-23 06:56:07,116] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/name/header/model.wapiti (size: 2225578)
Model path: /opt/grobid/grobid-home/models/name/header/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/name/citation/model.wapiti"
INFO [2020-05-23 06:56:07,333] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/name/citation/model.wapiti (size: 436519)
Model path: /opt/grobid/grobid-home/models/name/citation/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/header/model.wapiti"
INFO [2020-05-23 06:56:07,398] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/header/model.wapiti (size: 36094028)
Model path: /opt/grobid/grobid-home/models/header/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/date/model.wapiti"
INFO [2020-05-23 06:56:11,254] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/date/model.wapiti (size: 102435)
Model path: /opt/grobid/grobid-home/models/date/model.wapiti
INFO [2020-05-23 06:56:11,261] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/citation/model.wapiti (size: 16329542)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/citation/model.wapiti"
Model path: /opt/grobid/grobid-home/models/citation/model.wapiti
INFO [2020-05-23 06:56:12,784] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/fulltext/model.wapiti (size: 21112902)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/fulltext/model.wapiti"
Model path: /opt/grobid/grobid-home/models/fulltext/model.wapiti
INFO [2020-05-23 06:56:14,818] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/segmentation/model.wapiti (size: 16788068)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/segmentation/model.wapiti"
Model path: /opt/grobid/grobid-home/models/segmentation/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/reference-segmenter/model.wapiti"
INFO [2020-05-23 06:56:17,815] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/reference-segmenter/model.wapiti (size: 4921245)
Model path: /opt/grobid/grobid-home/models/reference-segmenter/model.wapiti
INFO [2020-05-23 06:56:18,369] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/figure/model.wapiti (size: 695735)
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/figure/model.wapiti"
Model path: /opt/grobid/grobid-home/models/figure/model.wapiti
[Wapiti] Loading model: "/opt/grobid/grobid-home/models/table/model.wapiti"
INFO [2020-05-23 06:56:18,494] org.grobid.core.jni.WapitiModel: Loading model: /opt/grobid/grobid-home/models/table/model.wapiti (size: 1364953)
Model path: /opt/grobid/grobid-home/models/table/model.wapiti
INFO [2020-05-23 06:56:18,571] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 1/10INFO [2020-05-23 06:56:18,685] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 2/10INFO [2020-05-23 06:56:18,741] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 3/10INFO [2020-05-23 06:56:18,743] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 4/10INFO [2020-05-23 06:56:18,744] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 5/10INFO [2020-05-23 06:56:18,745] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 6/10INFO [2020-05-23 06:56:18,747] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 7/10INFO [2020-05-23 06:56:18,747] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 8/10INFO [2020-05-23 06:56:18,748] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 9/10INFO [2020-05-23 06:56:18,780] org.grobid.core.factory.GrobidPoolingFactory: Number of Engines in pool active/max: 10/10
ERROR [2020-05-23 06:56:19,795] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
ERROR [2020-05-23 06:56:20,800] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
ERROR [2020-05-23 06:56:21,819] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
ERROR [2020-05-23 06:56:24,494] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:25 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 18620
172.17.0.1 - - [23/May/2020:06:56:25 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 18619
172.17.0.1 - - [23/May/2020:06:56:25 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 18621
172.17.0.1 - - [23/May/2020:06:56:25 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 18619
ERROR [2020-05-23 06:56:25,564] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:25 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 19144
ERROR [2020-05-23 06:56:26,570] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:26 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 20140
ERROR [2020-05-23 06:56:27,574] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:27 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 21148
ERROR [2020-05-23 06:56:28,583] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:28 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 22162
ERROR [2020-05-23 06:56:29,644] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:29 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 23222
WARN [2020-05-23 06:56:30,587] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-23 06:56:30,601] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-23 06:56:30,602] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
ERROR [2020-05-23 06:56:30,661] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:30 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 24251
ERROR [2020-05-23 06:56:37,858] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:37 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 7296
ERROR [2020-05-23 06:56:38,858] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:38 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 8894
ERROR [2020-05-23 06:56:39,859] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:39 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 9834
ERROR [2020-05-23 06:56:41,364] org.grobid.service.process.GrobidRestProcessFiles: Could not get an engine from the pool within configured time. Sending service unavailable.
172.17.0.1 - - [23/May/2020:06:56:41 +0000] "POST /api/processFulltextDocument HTTP/1.1" 503 279 "-" "Java/1.8.0_241" 11341
C:\Users\Gian>
|
Two things. First of all, you should use the latest version, which is the 0.6.0 (yes, I know the documentation said 0.5.6, I corrected this morning). 😅 💦 Secondly, that error is fine, when the pool is empty, the system return 503 (system unavailable) which makes the client wait and try again. What is not good is that the service ends after a while. Try to increase the memory: I will investigate also
but not today... |
Hello, the process seems to be running fine for now with 6gb of memory.
…On Sat, May 23, 2020 at 2:04 AM Luca Foppiano ***@***.***> wrote:
Two things.
First of all, you should use the latest version, which is the 0.6.0 (yes,
I know the documentation said 0.5.6, I corrected this morning). 😅 💦
Secondly, that error is fine, when the pool is empty, the system return
503 (system unavailable) which makes the client wait and try again. What is
not good is that the service ends after a while.
Try to increase the memory:
[image: image]
<https://user-images.githubusercontent.com/15426/82724162-a6d8c000-9cc3-11ea-9be6-cab7aebd207f.png>
I will investigate also
WARN [2020-05-23 06:56:30,587] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-23 06:56:30,601] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
WARN [2020-05-23 06:56:30,602] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
but not today...
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I will use 0.6.0
…On Sat, May 23, 2020 at 2:16 AM Gian Spadafora ***@***.***> wrote:
Hello, the process seems to be running fine for now with 6gb of memory.
On Sat, May 23, 2020 at 2:04 AM Luca Foppiano ***@***.***>
wrote:
> Two things.
>
> First of all, you should use the latest version, which is the 0.6.0 (yes,
> I know the documentation said 0.5.6, I corrected this morning). 😅 💦
>
> Secondly, that error is fine, when the pool is empty, the system return
> 503 (system unavailable) which makes the client wait and try again. What is
> not good is that the service ends after a while.
>
> Try to increase the memory:
>
> [image: image]
> <https://user-images.githubusercontent.com/15426/82724162-a6d8c000-9cc3-11ea-9be6-cab7aebd207f.png>
>
> I will investigate also
>
> WARN [2020-05-23 06:56:30,587] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
>
> WARN [2020-05-23 06:56:30,601] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
>
> WARN [2020-05-23 06:56:30,602] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
>
>
> but not today...
>
> —
> You are receiving this because you were mentioned.
> Reply to this email directly, view it on GitHub
> <#577 (comment)>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/AIQAFKU6XHASVACMZUAAK4TRS5YRDANCNFSM4MWZUKEA>
> .
>
|
Hello, I have run into an error again. This time it seems to be a stack
overflow error.
On Sat, May 23, 2020 at 2:16 AM Gian Spadafora ***@***.***> wrote:
I will use 0.6.0
On Sat, May 23, 2020 at 2:16 AM Gian Spadafora ***@***.***> wrote:
> Hello, the process seems to be running fine for now with 6gb of memory.
>
> On Sat, May 23, 2020 at 2:04 AM Luca Foppiano ***@***.***>
> wrote:
>
>> Two things.
>>
>> First of all, you should use the latest version, which is the 0.6.0
>> (yes, I know the documentation said 0.5.6, I corrected this morning). 😅
>> 💦
>>
>> Secondly, that error is fine, when the pool is empty, the system return
>> 503 (system unavailable) which makes the client wait and try again. What is
>> not good is that the service ends after a while.
>>
>> Try to increase the memory:
>>
>> [image: image]
>> <https://user-images.githubusercontent.com/15426/82724162-a6d8c000-9cc3-11ea-9be6-cab7aebd207f.png>
>>
>> I will investigate also
>>
>> WARN [2020-05-23 06:56:30,587] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
>>
>> WARN [2020-05-23 06:56:30,601] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
>>
>> WARN [2020-05-23 06:56:30,602] org.grobid.core.utilities.LanguageUtilities: Cannot detect language because of: java.lang.IllegalStateException: Cannot read profiles for cybozu language detection from: /opt/grobid/grobid-home/language-detection/cybozu/profiles
>>
>>
>> but not today...
>>
>> —
>> You are receiving this because you were mentioned.
>> Reply to this email directly, view it on GitHub
>> <#577 (comment)>,
>> or unsubscribe
>> <https://github.com/notifications/unsubscribe-auth/AIQAFKU6XHASVACMZUAAK4TRS5YRDANCNFSM4MWZUKEA>
>> .
>>
>
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidWorker.processCommand(GrobidWorker.java:56)
at org.grobid.client.GrobidWorker.run(GrobidWorker.java:48)
at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)
23 May 2020 10:38.57 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:38.59 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.18 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.18 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.18 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.18 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.18 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.18 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.18 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.18 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.19 [ERROR] GrobidService - Connection refused: connect
23 May 2020 10:39.21 [ERROR] GrobidService - Connection refused: connect
Exception in thread "pool-1-thread-5" java.lang.StackOverflowError
23 May 2020 10:39.40 [INFO ] GrobidWorker - pool-1-thread-12 Start. Processing = ..\PDF_FILES\10507327.pdf
at java.net.DualStackPlainSocketImpl.connect0(Native Method)
at java.net.DualStackPlainSocketImpl.socketConnect(Unknown Source)
at java.net.AbstractPlainSocketImpl.doConnect(Unknown Source)
at java.net.AbstractPlainSocketImpl.connectToAddress(Unknown Source)
at java.net.AbstractPlainSocketImpl.connect(Unknown Source)
at java.net.PlainSocketImpl.connect(Unknown Source)
at java.net.SocksSocketImpl.connect(Unknown Source)
at java.net.Socket.connect(Unknown Source)
at java.net.Socket.connect(Unknown Source)
at sun.net.NetworkClient.doConnect(Unknown Source)
at sun.net.www.http.HttpClient.openServer(Unknown Source)
at sun.net.www.http.HttpClient.openServer(Unknown Source)
at sun.net.www.http.HttpClient.<init>(Unknown Source)
at sun.net.www.http.HttpClient.New(Unknown Source)
at sun.net.www.http.HttpClient.New(Unknown Source)
at sun.net.www.protocol.http.HttpURLConnection.getNewHttpClient(Unknown Source)
at sun.net.www.protocol.http.HttpURLConnection.plainConnect0(Unknown Source)
at sun.net.www.protocol.http.HttpURLConnection.plainConnect(Unknown Source)
at sun.net.www.protocol.http.HttpURLConnection.connect(Unknown Source)
at sun.net.www.protocol.http.HttpURLConnection.getOutputStream0(Unknown Source)
at sun.net.www.protocol.http.HttpURLConnection.getOutputStream(Unknown Source)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:82)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
at org.grobid.client.GrobidService.runGrobid(GrobidService.java:110)
|
This seems that the docker container has been terminated. For large processing, 8Gb is probably enough. Otherwise, reduce the number of parallel threads in the client. |
@lucaspada894 adding more memory did fix the issue? |
Yes, it did. Thank you very much!
…On Mon, Jun 22, 2020, 8:58 PM Luca Foppiano ***@***.***> wrote:
@lucaspada894 <https://github.com/lucaspada894> adding more memory did
fix the issue?
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|
If you are satisfied, please close this issue. 😉 FYI I'm working on adding more documentation (mostly already discussed or written somewhere in here), you can see the preview here: https://grobid.readthedocs.io/en/add-developers-guide/ |
Oh, sorry about that. I will close the issue in the morning.
…On Tue, Jun 23, 2020, 1:00 AM Luca Foppiano ***@***.***> wrote:
If you are satisfied, please close this issue.
FYI I'm working on adding more documentation (mostly already discussed or
written somewhere in here), you can see the preview here:
https://grobid.readthedocs.io/en/add-developers-guide/
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@lucaspada894 I'm closing this issue. If more work is needed, feel free to reopen it again. |
Following the instructions on the grobid site, I cannot embed grobid into my JAVA project due to poor instructions regarding Gradle and Maven. Also, I do not know how to use the APIs because the Java documentation has different parameters for the methods. Specifically, fullTextToTei take in different arguments than what is shown in the Java docs.
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