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  • Hinxton, Cambridge

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  1. AlvMac AlvMac Public

    RNA-sequencing analysis of primary bovine alveolar macrophages infected with M. tuberculosis and M. bovis

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  2. Brankin_Malone_2022 Brankin_Malone_2022 Public

    Workbooks for generating figures for https://doi.org/10.1101/2021.09.14.460274

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  3. M.bovis-AF2122-genome-update M.bovis-AF2122-genome-update Public

    Updated Reference Genome Sequence and Annotation of Mycobacterium bovis AF2122/97

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  4. tb-amr-benchmarking-paper tb-amr-benchmarking-paper Public

    Forked from iqbal-lab-org/tb-amr-benchmarking-paper

    Code to generate publication figures and tables from output of tb-amr-benchmarking

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  5. head_to_head_pipeline head_to_head_pipeline Public

    Forked from mbhall88/head_to_head_pipeline

    Snakemake pipeline to run analysis for the Illumina vs. Nanopore comparison.

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  6. aLy6G_RNAseq aLy6G_RNAseq Public

    Analysis and graphing scripts for aLy6G treated pregnant mice.

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