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  1. mims-harvard/TDC mims-harvard/TDC Public

    Therapeutics Commons (TDC-2): Multimodal Foundation for Therapeutic Science

    Jupyter Notebook 1k 174

  2. DeepPurpose DeepPurpose Public

    A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

    Jupyter Notebook 973 272

  3. clinicalBERT clinicalBERT Public

    ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)

    Jupyter Notebook 380 97

  4. mims-harvard/TxGNN mims-harvard/TxGNN Public

    TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design

    Jupyter Notebook 136 33

  5. snap-stanford/conformalized-gnn snap-stanford/conformalized-gnn Public

    Uncertainty Quantification over Graph with Conformalized Graph Neural Networks (NeurIPS 2023)

    Python 70 6

  6. snap-stanford/GEARS snap-stanford/GEARS Public

    GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations

    Python 207 41