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kylegontjes/README.md
  • 👋 Hi, I’m @kylegontjes
  • 👀 I’m interested in comparative genomics, phylogenetics, and evolution.
  • 🌱 I’m currently learning: R, linux, and SAS.
  • 📫 How to reach me: kgontjes@umich.edu

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  1. CoverageStats CoverageStats Public

    Calculate coverage statistics after mapping short-read sequenced isolates to a reference sequence

    Python

  2. GeneScreener GeneScreener Public

    Snakemake to quickly screen gene presence in genes

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  3. ISScreener ISScreener Public

    Runs insertion sequence detection workflow on Illumina WGS data

    Python