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85 Open 280 Closed
85 Open 280 Closed
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Issues list

Curator saving records with a different version than the saved records results in duplicate key errors 🐛 bug
#2165 opened Nov 13, 2024 by Zethson
@Zethson @sunnyosun
🚸 Ensure that if an artifact is saved with a physical key, it won't overwrite an existing artifact if the user wants a new version
#2160 opened Nov 12, 2024 by falexwolf
@falexwolf
📝 Give an example in the Artifact API doc about how to make a new version through key
#2159 opened Nov 12, 2024 by falexwolf
@falexwolf
Running a specific import function can bring down all of supabase 🐛 bug priority
#2158 opened Nov 12, 2024 by Zethson
@sunnyosun
Can the Curator.validate() function be more efficient? ✨ feature ⚡ performance
#2154 opened Nov 11, 2024 by Zethson
Curator.validate() should not validate against synonyms and run standardize() under the hood ✨ feature
#2147 opened Nov 8, 2024 by Zethson
3 tasks
@Zethson @sunnyosun
Document annotate in query tutorial 📝 docs
#2138 opened Nov 7, 2024 by Zethson
IntegrityError: UNIQUE constraint failed: bionty_gene.ensembl_gene_id when repeatedly validating example dataset 🐛 bug
#2137 opened Nov 7, 2024 by Zethson
@sunnyosun
1
AnnData automatically converts int index to str, therefore matching some Gene synonyms 🐛 bug priority
#2124 opened Oct 31, 2024 by felix0097
@Zethson
14
Importing Curator objects without an active instance - improving gating ✨ feature
#2113 opened Oct 25, 2024 by Zethson
@falexwolf
Reduce verbosity of .describe() ✨ feature
#2112 opened Oct 25, 2024 by Zethson
✨ Need an optional way of copying data during transfer
#2111 opened Oct 25, 2024 by falexwolf
Improve documentation of Curator ✨ feature
#2109 opened Oct 24, 2024 by Zethson
@falexwolf @Zethson
add_validated_from_var_index is suggested but it doesn't even exist anymore 🐛 bug priority
#2108 opened Oct 24, 2024 by Zethson
@sunnyosun
1
Robust support of validating multiple values ✨ feature
#2101 opened Oct 22, 2024 by sunnyosun
1
🐛 print_types=True seems to lead to weird output on main branch, it's OK in the release
#2100 opened Oct 22, 2024 by falexwolf
1
Curator validated logging not working? 🐛 bug
#2099 opened Oct 22, 2024 by Zethson
@Zethson
2
Warn if working with a non-latest version of an artifact ✨ feature
#2093 opened Oct 22, 2024 by Koncopd
integrity error when trying to save genes after they've been saved already 🐛 bug
#2090 opened Oct 21, 2024 by Zethson
@sunnyosun
6
Discrepancy in behavior of validate in Curator and low level API for Pandas NAs 🐛 bug
#2079 opened Oct 18, 2024 by Zethson
@sunnyosun
Unable to pin Compound source when it has chebi source attached 🐛 bug
#2078 opened Oct 18, 2024 by Zethson
@sunnyosun
🚸 Duplicated logging message about where artifact will be stored
#2075 opened Oct 18, 2024 by falexwolf
@Koncopd
⚡ Deleting a transform is slow
#2069 opened Oct 18, 2024 by falexwolf
📝 Improve the "Lamin Process" graphic of the API
#2068 opened Oct 18, 2024 by falexwolf
1
Better error message when a label is not saved and user tries to annotate with it
#2067 opened Oct 17, 2024 by falexwolf
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