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feat: define Flat index as a scan over VectorStorage #2380

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merged 7 commits into from
May 23, 2024

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@chebbyChefNEQ chebbyChefNEQ commented May 22, 2024

[ghstack-poisoned]
[ghstack-poisoned]
chebbyChefNEQ added a commit that referenced this pull request May 22, 2024
ghstack-source-id: 5d8adb1c67e07d251cc9c617dd144b7f9660242d
Pull Request resolved: #2380
@github-actions github-actions bot added the enhancement New feature or request label May 22, 2024
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codecov-commenter commented May 23, 2024

Codecov Report

Attention: Patch coverage is 0% with 48 lines in your changes are missing coverage. Please review.

Please upload report for BASE (gh/chebbyChefNEQ/5/base@29d23c9). Learn more about missing BASE report.

Files Patch % Lines
rust/lance-index/src/vector/v3/subindex.rs 0.00% 48 Missing ⚠️
Additional details and impacted files
@@                    Coverage Diff                     @@
##             gh/chebbyChefNEQ/5/base    #2380   +/-   ##
==========================================================
  Coverage                           ?   79.96%           
==========================================================
  Files                              ?      200           
  Lines                              ?    54519           
  Branches                           ?    54519           
==========================================================
  Hits                               ?    43597           
  Misses                             ?     8400           
  Partials                           ?     2522           
Flag Coverage Δ
unittests 79.96% <0.00%> (?)

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impl<T: Num, Store: VectorStore> IvfSubIndex<T, Store> for FlatIndex {
type QueryParams = ();

fn index_name(&self) -> &str {
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flat is not IVF_FLAT?

@@ -60,3 +69,71 @@ pub trait IvfSubIndex<T: Num, Store: VectorStore>: Send + Sync + Sized {
self.to_array()
}
}

struct FlatIndex {}
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pub?
Please add comments?

rust/lance-index/src/vector/v3/subindex.rs Outdated Show resolved Hide resolved
rust/lance-index/src/vector/v3/subindex.rs Show resolved Hide resolved
[ghstack-poisoned]
chebbyChefNEQ added a commit that referenced this pull request May 23, 2024
ghstack-source-id: 64bee5f06dc4868e11e9754f73a2f7d1b68dbe41
Pull Request resolved: #2380
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Pending addressing comments.

[ghstack-poisoned]
[ghstack-poisoned]
chebbyChefNEQ added a commit that referenced this pull request May 23, 2024
ghstack-source-id: dcbf9822d8e276436ed51685967fad3773be0932
Pull Request resolved: #2380
[ghstack-poisoned]
[ghstack-poisoned]
chebbyChefNEQ added a commit that referenced this pull request May 23, 2024
ghstack-source-id: 8c523fd8abb4f69352fa6998a25090e8c2ea1e6c
Pull Request resolved: #2380
@chebbyChefNEQ chebbyChefNEQ changed the base branch from gh/chebbyChefNEQ/5/base to main May 23, 2024 04:00
@chebbyChefNEQ chebbyChefNEQ merged commit 3dd63b8 into main May 23, 2024
24 checks passed
@chebbyChefNEQ chebbyChefNEQ deleted the gh/chebbyChefNEQ/5/head branch May 23, 2024 04:12
renovate bot added a commit to spiraldb/vortex that referenced this pull request Jun 12, 2024
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This PR contains the following updates:

| Package | Type | Update | Change |
|---|---|---|---|
| [lance](https://togithub.com/lancedb/lance) | dependencies | minor |
`0.10.16` -> `0.12.0` |

---

### Release Notes

<details>
<summary>lancedb/lance (lance)</summary>

### [`v0.12.1`](https://togithub.com/lancedb/lance/releases/tag/v0.12.1)

[Compare
Source](https://togithub.com/lancedb/lance/compare/v0.12.0...v0.12.1)

<!-- Release notes generated using configuration in .github/release.yml
at v0.12.1 -->

#### What's Changed

##### Bug Fixes 🐛

- fix: incorrect chunking was making lance datasets use too much RAM by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2438

**Full Changelog**:
lancedb/lance@v0.12.0...v0.12.1

### [`v0.12.0`](https://togithub.com/lancedb/lance/releases/tag/v0.12.0)

[Compare
Source](https://togithub.com/lancedb/lance/compare/v0.11.1...v0.12.0)

<!-- Release notes generated using configuration in .github/release.yml
at v0.12.0 -->

#### What's Changed

##### Breaking Changes 🛠

- feat: change dataset uri to return full qualified url instead of
object store path by [@&#8203;eddyxu](https://togithub.com/eddyxu) in
[lancedb/lance#2416

##### New Features 🎉

- feat: new shuffler by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2404
- feat: new index builder by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2401
- feat: stable row id manifest changes by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2363
- feat: once a table has been created with v1 or v2 format then it
should always use that format by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2435

##### Bug Fixes 🐛

- fix: fix file writer which was not writing page buffers in the correct
order by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2413

##### Other Changes

- refactor: refactor logical decoders into "field decoders" by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2407
- refactor: rename use_experimental_writer to use_legacy_format by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2433
- refactor: minor refactor to allow I/O scheduler to be cloned in page
schedulers by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2432

**Full Changelog**:
lancedb/lance@v0.11.1...v0.12.0

### [`v0.11.1`](https://togithub.com/lancedb/lance/releases/tag/v0.11.1)

[Compare
Source](https://togithub.com/lancedb/lance/compare/v0.11.0...v0.11.1)

<!-- Release notes generated using configuration in .github/release.yml
at v0.11.1 -->

#### What's Changed

##### New Features 🎉

- feat(java): support jdk8 by
[@&#8203;LuQQiu](https://togithub.com/LuQQiu) in
[lancedb/lance#2362
- feat: support kmode with hamming distance by
[@&#8203;eddyxu](https://togithub.com/eddyxu) in
[lancedb/lance#2366
- feat: row id index structures (experimental) by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2303
- feat: update merge_insert to add statistics for inserted, updated,
deleted rows by [@&#8203;raunaks13](https://togithub.com/raunaks13) in
[lancedb/lance#2357
- feat: define Flat index as a scan over VectorStorage by
[@&#8203;chebbyChefNEQ](https://togithub.com/chebbyChefNEQ) in
[lancedb/lance#2380
- feat: add some schema utility methods to the v2 reader/writer by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2389
- feat: general compression for value page buffer by
[@&#8203;niyue](https://togithub.com/niyue) in
[lancedb/lance#2368
- feat: make the index cache size (in bytes) available by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2381
- feat: add special uri scheme to use CloudFileReader for local fs by
[@&#8203;chebbyChefNEQ](https://togithub.com/chebbyChefNEQ) in
[lancedb/lance#2402
- feat: add encoder utilities for pushdown by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2388

##### Bug Fixes 🐛

- fix: concat batches before writing to avoid small IO slow down by
[@&#8203;chebbyChefNEQ](https://togithub.com/chebbyChefNEQ) in
[lancedb/lance#2384
- fix: low recall if the num partitions is more than num rows by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2386
- fix: f32 reduce_min for x86 by
[@&#8203;heiher](https://togithub.com/heiher) in
[lancedb/lance#2385
- fix: fix incorrect validation logic in updater by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2408

##### Performance Improvements 🚀

- perf: make VectorStorage and DistCalculator static to generate better
code by [@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2355
- perf: optimize IO path for reading manifest by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2396

##### Other Changes

- refactor: make proto conversion fallible and not copy by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2371
- refactor: separate take and schema evolution impls to own files by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2372
- Revert "fix: concat batches before writing to avoid small IO slow down
([#&#8203;2384](https://togithub.com/lancedb/lance/issues/2384))" by
[@&#8203;chebbyChefNEQ](https://togithub.com/chebbyChefNEQ) in
[lancedb/lance#2387
- refactor: shuffle around v2 metadata sections to allow read-on-demand
statistics by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2400

#### New Contributors

- [@&#8203;niyue](https://togithub.com/niyue) made their first
contribution in
[lancedb/lance#2368
- [@&#8203;heiher](https://togithub.com/heiher) made their first
contribution in
[lancedb/lance#2385

**Full Changelog**:
lancedb/lance@v0.11.0...v0.11.1

### [`v0.11.0`](https://togithub.com/lancedb/lance/releases/tag/v0.11.0)

[Compare
Source](https://togithub.com/lancedb/lance/compare/v0.10.18...v0.11.0)

<!-- Release notes generated using configuration in .github/release.yml
at v0.11.0 -->

#### What's Changed

##### Breaking Changes 🛠

- feat(rust)!: use BoxedError in Error::IO by
[@&#8203;broccoliSpicy](https://togithub.com/broccoliSpicy) in
[lancedb/lance#2329

##### New Features 🎉

- feat: add v2 support to fragment merge / update paths by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2311
- feat: add priority to I/O scheduler by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2315
- feat: add take_rows operation to the v2 file reader's python bindings
by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2331
- feat: added example for reading and writing dataset in rust by
[@&#8203;raunaks13](https://togithub.com/raunaks13) in
[lancedb/lance#2349
- feat: new HNSW implementation by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2353
- feat: add fragment take / fixed-size-binary support to v2 format by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2354

##### Bug Fixes 🐛

- fix: recognize a simple expression like 'is_foo' as a scalar index
query by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2356
- fix: rework list encoder to handle list-struct by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2344
- fix: minor bug fixes for v2 by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2361

##### Documentation 📚

- docs: clearify comments in table.proto -> message DataFragment ->
physical_rows by
[@&#8203;broccoliSpicy](https://togithub.com/broccoliSpicy) in
[lancedb/lance#2346

##### Performance Improvements 🚀

- perf: use the file metadata cache in scalar indices by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2330

##### Other Changes

- chore: remove `m_max` and `use_heuristic` params from HNSW builder by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2336
- fix(java): fix JNI jar loader issue by
[@&#8203;LuQQiu](https://togithub.com/LuQQiu) in
[lancedb/lance#2340
- ci: fix labeler permissions by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2348
- fix: rework decoding to fix bugs in nested struct decoding by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2337

#### New Contributors

- [@&#8203;broccoliSpicy](https://togithub.com/broccoliSpicy) made their
first contribution in
[lancedb/lance#2346
- [@&#8203;raunaks13](https://togithub.com/raunaks13) made their first
contribution in
[lancedb/lance#2349

**Full Changelog**:
lancedb/lance@v0.10.18...v0.11.0

</details>

---

### Configuration

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Automerge - At any time (no schedule defined).

🚦 **Automerge**: Enabled.

♻ **Rebasing**: Whenever PR becomes conflicted, or you tick the
rebase/retry checkbox.

🔕 **Ignore**: Close this PR and you won't be reminded about this update
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---

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---

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AdamGS pushed a commit to AdamGS/vortex that referenced this pull request Jun 14, 2024
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This PR contains the following updates:

| Package | Type | Update | Change |
|---|---|---|---|
| [lance](https://togithub.com/lancedb/lance) | dependencies | minor |
`0.10.16` -> `0.12.0` |

---

### Release Notes

<details>
<summary>lancedb/lance (lance)</summary>

### [`v0.12.1`](https://togithub.com/lancedb/lance/releases/tag/v0.12.1)

[Compare
Source](https://togithub.com/lancedb/lance/compare/v0.12.0...v0.12.1)

<!-- Release notes generated using configuration in .github/release.yml
at v0.12.1 -->

#### What's Changed

##### Bug Fixes 🐛

- fix: incorrect chunking was making lance datasets use too much RAM by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2438

**Full Changelog**:
lancedb/lance@v0.12.0...v0.12.1

### [`v0.12.0`](https://togithub.com/lancedb/lance/releases/tag/v0.12.0)

[Compare
Source](https://togithub.com/lancedb/lance/compare/v0.11.1...v0.12.0)

<!-- Release notes generated using configuration in .github/release.yml
at v0.12.0 -->

#### What's Changed

##### Breaking Changes 🛠

- feat: change dataset uri to return full qualified url instead of
object store path by [@&#8203;eddyxu](https://togithub.com/eddyxu) in
[lancedb/lance#2416

##### New Features 🎉

- feat: new shuffler by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2404
- feat: new index builder by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2401
- feat: stable row id manifest changes by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2363
- feat: once a table has been created with v1 or v2 format then it
should always use that format by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2435

##### Bug Fixes 🐛

- fix: fix file writer which was not writing page buffers in the correct
order by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2413

##### Other Changes

- refactor: refactor logical decoders into "field decoders" by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2407
- refactor: rename use_experimental_writer to use_legacy_format by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2433
- refactor: minor refactor to allow I/O scheduler to be cloned in page
schedulers by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2432

**Full Changelog**:
lancedb/lance@v0.11.1...v0.12.0

### [`v0.11.1`](https://togithub.com/lancedb/lance/releases/tag/v0.11.1)

[Compare
Source](https://togithub.com/lancedb/lance/compare/v0.11.0...v0.11.1)

<!-- Release notes generated using configuration in .github/release.yml
at v0.11.1 -->

#### What's Changed

##### New Features 🎉

- feat(java): support jdk8 by
[@&#8203;LuQQiu](https://togithub.com/LuQQiu) in
[lancedb/lance#2362
- feat: support kmode with hamming distance by
[@&#8203;eddyxu](https://togithub.com/eddyxu) in
[lancedb/lance#2366
- feat: row id index structures (experimental) by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2303
- feat: update merge_insert to add statistics for inserted, updated,
deleted rows by [@&#8203;raunaks13](https://togithub.com/raunaks13) in
[lancedb/lance#2357
- feat: define Flat index as a scan over VectorStorage by
[@&#8203;chebbyChefNEQ](https://togithub.com/chebbyChefNEQ) in
[lancedb/lance#2380
- feat: add some schema utility methods to the v2 reader/writer by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2389
- feat: general compression for value page buffer by
[@&#8203;niyue](https://togithub.com/niyue) in
[lancedb/lance#2368
- feat: make the index cache size (in bytes) available by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2381
- feat: add special uri scheme to use CloudFileReader for local fs by
[@&#8203;chebbyChefNEQ](https://togithub.com/chebbyChefNEQ) in
[lancedb/lance#2402
- feat: add encoder utilities for pushdown by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2388

##### Bug Fixes 🐛

- fix: concat batches before writing to avoid small IO slow down by
[@&#8203;chebbyChefNEQ](https://togithub.com/chebbyChefNEQ) in
[lancedb/lance#2384
- fix: low recall if the num partitions is more than num rows by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2386
- fix: f32 reduce_min for x86 by
[@&#8203;heiher](https://togithub.com/heiher) in
[lancedb/lance#2385
- fix: fix incorrect validation logic in updater by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2408

##### Performance Improvements 🚀

- perf: make VectorStorage and DistCalculator static to generate better
code by [@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2355
- perf: optimize IO path for reading manifest by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2396

##### Other Changes

- refactor: make proto conversion fallible and not copy by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2371
- refactor: separate take and schema evolution impls to own files by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2372
- Revert "fix: concat batches before writing to avoid small IO slow down
([#&#8203;2384](https://togithub.com/lancedb/lance/issues/2384))" by
[@&#8203;chebbyChefNEQ](https://togithub.com/chebbyChefNEQ) in
[lancedb/lance#2387
- refactor: shuffle around v2 metadata sections to allow read-on-demand
statistics by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2400

#### New Contributors

- [@&#8203;niyue](https://togithub.com/niyue) made their first
contribution in
[lancedb/lance#2368
- [@&#8203;heiher](https://togithub.com/heiher) made their first
contribution in
[lancedb/lance#2385

**Full Changelog**:
lancedb/lance@v0.11.0...v0.11.1

### [`v0.11.0`](https://togithub.com/lancedb/lance/releases/tag/v0.11.0)

[Compare
Source](https://togithub.com/lancedb/lance/compare/v0.10.18...v0.11.0)

<!-- Release notes generated using configuration in .github/release.yml
at v0.11.0 -->

#### What's Changed

##### Breaking Changes 🛠

- feat(rust)!: use BoxedError in Error::IO by
[@&#8203;broccoliSpicy](https://togithub.com/broccoliSpicy) in
[lancedb/lance#2329

##### New Features 🎉

- feat: add v2 support to fragment merge / update paths by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2311
- feat: add priority to I/O scheduler by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2315
- feat: add take_rows operation to the v2 file reader's python bindings
by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2331
- feat: added example for reading and writing dataset in rust by
[@&#8203;raunaks13](https://togithub.com/raunaks13) in
[lancedb/lance#2349
- feat: new HNSW implementation by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2353
- feat: add fragment take / fixed-size-binary support to v2 format by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2354

##### Bug Fixes 🐛

- fix: recognize a simple expression like 'is_foo' as a scalar index
query by [@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2356
- fix: rework list encoder to handle list-struct by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2344
- fix: minor bug fixes for v2 by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2361

##### Documentation 📚

- docs: clearify comments in table.proto -> message DataFragment ->
physical_rows by
[@&#8203;broccoliSpicy](https://togithub.com/broccoliSpicy) in
[lancedb/lance#2346

##### Performance Improvements 🚀

- perf: use the file metadata cache in scalar indices by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2330

##### Other Changes

- chore: remove `m_max` and `use_heuristic` params from HNSW builder by
[@&#8203;BubbleCal](https://togithub.com/BubbleCal) in
[lancedb/lance#2336
- fix(java): fix JNI jar loader issue by
[@&#8203;LuQQiu](https://togithub.com/LuQQiu) in
[lancedb/lance#2340
- ci: fix labeler permissions by
[@&#8203;wjones127](https://togithub.com/wjones127) in
[lancedb/lance#2348
- fix: rework decoding to fix bugs in nested struct decoding by
[@&#8203;westonpace](https://togithub.com/westonpace) in
[lancedb/lance#2337

#### New Contributors

- [@&#8203;broccoliSpicy](https://togithub.com/broccoliSpicy) made their
first contribution in
[lancedb/lance#2346
- [@&#8203;raunaks13](https://togithub.com/raunaks13) made their first
contribution in
[lancedb/lance#2349

**Full Changelog**:
lancedb/lance@v0.10.18...v0.11.0

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