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Updated the requirements file + install instructs. #72

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Oct 2, 2020
Merged

Updated the requirements file + install instructs. #72

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5 changes: 5 additions & 0 deletions README.md
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Expand Up @@ -21,6 +21,11 @@ One-line install using [pip](https://pypi.python.org/pypi/pip):

pip install ionize

Alternatively, if you're installing from source:
- Clone the repository, and `cd` into the `ionize` directory.
- Install the dependencies with `pip3 install -r requirements.txt`
- Install `ionize` using `python3 setup.py install`

Tutorial
--------
Want to use **ionize**? Read the [tutorial][tutorial].
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2 changes: 1 addition & 1 deletion docs/source/conf.py
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Expand Up @@ -17,7 +17,7 @@

import sys
import os
import mock
import unittest.mock as mock
MOCK_MODULES = ['numpy', 'scipy', 'scipy.optimize', 'numpy.linalg', 'Bio',
'Bio.SeqUtils', 'Bio.SeqUtils.IsoelectricPoint',
'Bio.SeqUtils.ProtParam']
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7 changes: 7 additions & 0 deletions requirements.txt
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@@ -0,0 +1,7 @@
pandas>=1.0.1
pypandoc>=1.4
numpy>=1.18.1
scipy>=1.4.1
Click>=7.0
biopython>=0.0.6
simplejson>=3.17.2