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subseq not using the strand information in bed #69

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pengchy opened this issue Nov 19, 2015 · 2 comments
Closed

subseq not using the strand information in bed #69

pengchy opened this issue Nov 19, 2015 · 2 comments

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@pengchy
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pengchy commented Nov 19, 2015

Hi,
seqtk is so powerful and helpful to my regular work.
One problem for subseq tool is that it does not using the strand information in the bed file. I have tested using the same position with different strand information with same returned results.

Best,
Pengcheng

@lh3
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lh3 commented Nov 19, 2015

Unfortunately, seqtk ignores the strand field of bed. Will consider in future.

@pengchy
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pengchy commented Nov 21, 2015

Ok, thank you!

@pengchy pengchy closed this as completed Nov 21, 2015
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