HGT-network

This project contains codes and data for paper "Understanding Horizontal Gene Transfer Network in Human Gut Microbiota".

Name		Name	Last commit message	Last commit date
Latest commit History 16 Commits
.idea		.idea
Gene Fusion Analysis		Gene Fusion Analysis
HGT Community Analysis		HGT Community Analysis
HGT Event Analysis		HGT Event Analysis
__pycache__		__pycache__
analysis_node		analysis_node
for_data		for_data
for_reconstruction		for_reconstruction
test_data		test_data
visualization		visualization
.DS_Store		.DS_Store
README.md		README.md
Readme version2		Readme version2
Rfunction_for_cluster.R		Rfunction_for_cluster.R
Rfunctions_for_community_evolution.R		Rfunctions_for_community_evolution.R
Rmain_cluster_hgt_event.R		Rmain_cluster_hgt_event.R
Rmain_community_cluster.R		Rmain_community_cluster.R
Rmain_community_evolution.R		Rmain_community_evolution.R
__init__.py		__init__.py
batch_network_analysis.py		batch_network_analysis.py
batch_network_analysis.pyc		batch_network_analysis.pyc
main.py		main.py
scale_free.py		scale_free.py

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