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find bwa from path #26

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EricDeveaud
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Hello,

this small modification allows bwa to be found based on the user PATH.
since python-3.3 shutil.which() to provide a cross-platform means of discovering executables.

I had to modify the test suite in order to find bwa, which in our cas is provided by module environment. so in a non canonical location.

regards

Erc

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