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Perform Alignment-free k-tuple frequency comparisons from sequences. This can be in the form of two input files (e.g. a reference and a query) or a single file for pairwise comparisons to be made.
Forked from uhkniazi/dismiss
DISMISS is an R script, which as an additional step in MeDIP-Seq data analysis workflow, enables the allocation of strands to methylated DNA regions. It does this by analyzing the proportions of fi…
Perl Script to convert CUFFDIFF output for use with edgeR and Trinity DE analysis
Implementation of Xiao., Y. 2014. A novel significance score for gene selection and ranking.
Tools developed for use in Xiaoqi Feng's lab.
K-Mer counter using TBB and all of your RAM!
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