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1. KAST KAST Public

   Perform Alignment-free k-tuple frequency comparisons from sequences. This can be in the form of two input files (e.g. a reference and a query) or a single file for pairwise comparisons to be made.

   C++ 8 1

2. dismiss-galaxy dismiss-galaxy Public

   Forked from uhkniazi/dismiss

   DISMISS is an R script, which as an additional step in MeDIP-Seq data analysis workflow, enables the allocation of strands to methylated DNA regions. It does this by analyzing the proportions of fi…

   R 1

3. cuffdiff2edgeR cuffdiff2edgeR Public

   Perl Script to convert CUFFDIFF output for use with edgeR and Trinity DE analysis

   Perl 2 1

4. cuff_diff_2_xiao_score cuff_diff_2_xiao_score Public

   Implementation of Xiao., Y. 2014. A novel significance score for gene selection and ranking.

   Python 1

5. xftools xftools Public

   Tools developed for use in Xiaoqi Feng's lab.

   C++ 4 4

6. kmer_counter kmer_counter Public

   K-Mer counter using TBB and all of your RAM!

   C++