Update pytest-split durations (#3211)

* fix .gitattributes outdated test_files/**/* linguist-vendored causing wrong language detection

* test.yml fix --durations-path (test_files->tests/files)/.pytest-split-durations

* test_entry_tools.py del unused outdated test_dir

* update pytest-split durations with new jobs that weren't previously discovered since unittest to pytest transition due to XXTest class name ending, not starting with TestXX (oops!)

* re-add pymatgen-white.svg and fix link to logo in readme

set frameborder="0" on <iframe src="/assets/team-map.html">

.gitattributes

@@ -1,5 +1,5 @@
 # declare HTML, rST and test files as vendored/docs to exclude them when calculating repo languages on GitHub
-**/test_files/**/* linguist-vendored
+**/test/files/**/* linguist-vendored
 cmd_line/* linguist-vendored
 docs/**/* linguist-generated
 docs_rst/**/* linguist-documentation

.github/workflows/test.yml

@@ -93,11 +93,11 @@ jobs:
           python -m pip install numpy cython packaging
           python -m pip install -e '.[dev,optional]'
       - name: pytest split ${{ matrix.split }}
-        # to update the test durations, run
-        # pytest --store-durations --durations-path test_files/.pytest-split-durations
+        # to update the test durations, do pip install pytest-split and run
+        # pytest --store-durations --durations-path tests/files/.pytest-split-durations
         # and commit the results (requires pip install pytest-split)
         run: |
-          pytest --cov=pymatgen --cov-report=xml --splits 10 --group ${{ matrix.split }} --durations-path test_files/.pytest-split-durations tests
+          pytest --cov=pymatgen --cov-report=xml --splits 10 --group ${{ matrix.split }} --durations-path tests/files/.pytest-split-durations tests
       - name: Upload coverage
         uses: actions/upload-artifact@v3
         with:

README.md

@@ -1,7 +1,7 @@
 <h1 align="center">
   <picture>
-    <source media="(prefers-color-scheme: dark)" srcset="https://raw.githubusercontent.com/materialsproject/pymatgen/master/docs/assets/pymatgen-white.svg">
-    <img alt="Logo" src="https://raw.githubusercontent.com/materialsproject/pymatgen/master/docs/assets/pymatgen.svg"
+    <source media="(prefers-color-scheme: dark)" srcset="https://github.com/materialsproject/pymatgen/raw/master/docs/assets/pymatgen-white.svg">
+    <img alt="Logo" src="https://github.com/materialsproject/pymatgen/raw/master/docs/assets/pymatgen.svg"
 height="70">
   </picture>
 </h1>

tests/entries/test_entry_tools.py

@@ -2,7 +2,6 @@
 
 import os
 import unittest
-from pathlib import Path
 
 import pytest
 from monty.serialization import dumpfn, loadfn
@@ -12,8 +11,6 @@
 from pymatgen.entries.entry_tools import EntrySet, group_entries_by_composition, group_entries_by_structure
 from pymatgen.util.testing import PymatgenTest
 
-test_dir = Path(__file__).absolute().parent / ".." / ".." / ".." / "test_files"
-
 
 class TestFunc(unittest.TestCase):
     def test_group_entries_by_structure(self):