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Single short lines in the middle of a file are not detected #44

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mdshw5 opened this issue Jan 20, 2015 · 2 comments
Closed

Single short lines in the middle of a file are not detected #44

mdshw5 opened this issue Jan 20, 2015 · 2 comments
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mdshw5 commented Jan 20, 2015 

>AB821309.1
ATGGTCAGCTGGGGTCGTTTCATCTGCCTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCCCGGCCCT
CCTTCAGTTTAGTTGAGGATACCACATTAGAGCCAGAAGATGCCATCTCATCCGGAGATGATGAGA
CACCGATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACAACAAGAGAGCACCATACTGGACCAACACA

does not raise an error
@mdshw5 mdshw5 added the bug label Jan 20, 2015
@mdshw5 mdshw5 self-assigned this Jan 20, 2015
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mdshw5 commented Jan 20, 2015

Currently produces"

(py34)LT-SHIRLEYM:data matt$ faidx short_line.fasta
>AB821309.1
ATGGTCAGCTGGGGTCGTTTCATCTGCCTGGTCGTGGTCACCATGGCAACCTTGTCCCTGGCCCGGCCCT
CCTTCAGTTTAGTTGAGGATACCACATTAGAGCCAGAAGATGCCATCTCATCCGGAGATGATGAGACACC
GATGGTGCGGAAGATTTTGTCAGTGAGAACAGTAACAACAAGAGAGCACCATACTGGACCAACACA

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mdshw5 commented Jan 20, 2015

Fixed in 48dd070.

@mdshw5 mdshw5 closed this as completed Jan 20, 2015
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