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meh47336/README.md

Hi, I'm Max. Currently a PhD candidate in the Biochemistry and Structural Biology program at Stony Brook University. My thesis work is under the supervision of Dr. Qun Liu at Brookhaven National Laboratories where I'm using a combination of various computational approaches as well as extperimental structural biology techniques to predict and validate novel protein-protein interactions between humans and viruses. I've started coding around Winter 2021 though the exposure and progression has slowed recently. My interests are molecular dynamics as well as applications of machine learning to protein structure and analysis. Still new to this but hope being involved here helps!

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  1. ESMBind ESMBind Public

    Forked from Structurebiology-BNL/ESMBind

    Deep learning + physical modeling for 3D protein metal ion binding prediction

    Python 1

  2. chainpy chainpy Public

    Reformat AlphaFold on Summit heterodimer PDBs

    Python

  3. interface-plddt interface-plddt Public

    Calculate the pLDDT scores of residues involved in AlphaFold predictions' dimeric interfaces

    Shell