Scale metadata handling for positions #93
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edyoshikun
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* first pass on VSCyto2D demo * bumping to cellpose 3 (#92) * adding fix for the scale metadata to handle positions as well. (#93) * adding the working example. pending missing comments. * adding vscyto3d example * adding readme * minor typo on readme.md * updating scripts to show the experimental fluorescence and adding the neuromast inference demo. * adding nueromast demo * touch README * update paths for vscyto2d * update paths for vscyto3d * update paths for vsneuromast * use new artifact name * adding plotting function. --------- Co-authored-by: Ziwen Liu <ziwen.liu@czbiohub.org>
edyoshikun
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edyoshikun
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* first pass on VSCyto2D demo * bumping to cellpose 3 (#92) * adding fix for the scale metadata to handle positions as well. (#93) * adding the working example. pending missing comments. * adding vscyto3d example * adding readme * minor typo on readme.md * updating scripts to show the experimental fluorescence and adding the neuromast inference demo. * adding nueromast demo * touch README * update paths for vscyto2d * update paths for vscyto3d * update paths for vsneuromast * use new artifact name * adding plotting function. --------- Co-authored-by: Ziwen Liu <ziwen.liu@czbiohub.org>
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This PR fixes the bug for the scale_metadata to retrieve the scale metadata if the input is a Positions or Plate level.