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python wrapper function read_bedbimfam #24

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shadiakiki1986 opened this issue Jul 27, 2020 · 2 comments
Closed

python wrapper function read_bedbimfam #24

shadiakiki1986 opened this issue Jul 27, 2020 · 2 comments

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@shadiakiki1986
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I created a wrapper function to simplify reading plink files in python using libplinkio. It is defined and illustrated in this jupyter notebook https://gist.github.com/shadiakiki1986/336606ab067052203607309a3ee2d7a4

Would this be suitable for a PR?

@mfranberg
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Hi @shadiakiki1986 sorry for the slow response and thank you for the contribution. I try to keep this library to have as few dependencies as possible, so pandas and numpy would be too much. But feel free to make a library wrapping this one, I for one, think it is very useful to get out a dataframe.

@mfranberg
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I will close this issue.

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