NMDC Sample Metadata Template: currently undefined usage of samp_collect_device

[turbomam]

This is one component of issue #375

From mixs.yaml:

name: samp_collec_device
definition_uri: https://w3id.org/mixs/vocab/samp_collec_device
aliases:
- sample collection device
mappings:
- MIXS:0000002
description: The device used to collect an environmental sample. This field accepts
  terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO).
  This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).
comments:
- 'Expected value: device name'
- 'Position: 31.0'
examples:
- value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]
from_schema: http://w3id.org/mixs/terms
exact_mappings:
- 'MIGS:'
is_a: nucleic acid sequence source field
range: string
slot_uri: MIXS:0000002
owner: core
domain_of:
- MIGS eukaryote
- MIGS bacteria
- MIGS plant
- MIGS virus
- MIGS org
- ME
- MIMARKS specimen
- MIMARKS survey
- MISAG
- MIMAG
- MIUVIG
- core
pattern: '{termLabel} {[termID]}|{text}'

I think the MenuTerms tab in the NMDC Sample Metadata Template is implying the following as descendants of the samp_collect_device slot:

• shovel
• slide_hammer_core
• deep_corer
• russian_corer
• sipper
• other-samp_collect_device

All of which would take a string range

Also, double check samp_collect_device vs samp_collec_device

[mslarae13]

samp_collec_device is used in V6