R Package for Cancer Rule-Set Optimization (CRSO) The package contains all of the functionality of latest version of the CRSO algorithm (doi:https://doi.org/10.1101/2020.06.29.168229).
Upcoming improvements will include:
- functions for producing figures representing the results
- upgraded vignettes and additional examples
- code for direct calculation of passenger penalties from TCGA result files.
The package will soon be available for direct installation via the CRAN repository.