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Mass Obsoletion: focus on branch 'upper digestive tract disorder' (MONDO:0044991) #6650

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sabrinatoro opened this issue Sep 15, 2023 · 1 comment · Fixed by #6654
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Mass Obsoletion: focus on branch 'upper digestive tract disorder' (MONDO:0044991) #6650

sabrinatoro opened this issue Sep 15, 2023 · 1 comment · Fixed by #6654
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@nicolevasilevsky
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mass obsoletion
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[obsolete] Novemb...

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@sabrinatoro
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Branch: 'upper digestive tract disorder' (MONDO:0044991)

Terms to obsolete:

obsoletion candidate ID obsoletion candidate name
http://purl.obolibrary.org/obo/MONDO_0015207 non-syndromic esophageal malformation
http://purl.obolibrary.org/obo/MONDO_0015208 syndromic esophageal malformation
http://purl.obolibrary.org/obo/MONDO_0019513 esophageal malformation
http://purl.obolibrary.org/obo/MONDO_0019619 duplication of the esophagus
@sabrinatoro sabrinatoro changed the title Mass Obsoletion: branch 'upper digestive tract disorder' (MONDO:0044991) Mass Obsoletion: focus on branch 'upper digestive tract disorder' (MONDO:0044991) Sep 15, 2023
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instructions: https://mondo.readthedocs.io/en/latest/editors-guide/merging-and-obsoleting/#simple-mass-obsoletion-pipeline

@nicolevasilevsky nicolevasilevsky added this to the November release milestone Sep 15, 2023
nicolevasilevsky added a commit that referenced this issue Sep 15, 2023
@nicolevasilevsky
obsolete children of 'upper digestive tract disorder' (MONDO:0044991)
edc89bf 
close #6650
@nicolevasilevsky nicolevasilevsky mentioned this issue Sep 15, 2023
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nicolevasilevsky added a commit that referenced this issue Sep 27, 2023
@nicolevasilevsky @sabrinatoro
obsolete children of 'upper digestive tract disorder' (MONDO:0044991) (…
d3da5e8 
…#6654)

* obsolete children of 'upper digestive tract disorder' (MONDO:0044991)

close #6650

* reclassify 'esophageal atresia/tracheoesophageal fistula'

* reclassify 'VACTERL/vater association'

* reclassify 'triple-A syndrome'

* RECLASSIFY children

* fix single child

* fix obs reason

* add parent

* fix superclass

---------

Co-authored-by: Sabrina Toro <sabrina@tislab.org>
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obsolete children of 'upper digestive tract disorder' (MONDO:0044991) monarch-initiative/mondo
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@nicolevasilevsky @sabrinatoro