Lighter v1.1.3

• Allow recursive folder creation for the "-od" option.

Lighter v1.1.2

• Allow dumping and loading trusted kmers.
• Fix a serious bug that may cause crashing when using more than 2 threads. (Thanks to @ealdraed).

Lighter v1.1.1

• Fix a bug that may trim the sequence of a read.

Lighter v1.1.0

• Allow user to change maximum kmer size before compile Lighter.
• Change the definition of -maxcor.
• Fix some bugs affecting the sensitivity of correction.

Lighter v1.0.7

• Improve the sensitivity of error correction while keeping precision.
• Fix a bug of reading files when sampling and obtaining solid kmers. So now, each run with the same setting generates the same results.
• Fix a small issue when reporting the summary of results.

Lighter v1.0.6

• Improved the error correction module
• Can generate the same result when multi-threading ("derandomization")
• Faster way to estimate the false positive rate of bloom filter
• Changed the output file name when the input files are gizpped.

Lighter v1.0.5

• Optimize the parallelization of error correction stage.
• Slightly optimize the parallelization of obtaining solid kmer stage.
• Slightly improvement to the sensitivity
• Can change the compress level by "-zlib". Can set the new quality score for corrected bases by "-newQual".

Lighter v1.0.4

• Support gzip'ed files
• Provide "-K" parameter which infers the coverage and alpha given genome size.

Lighter v1.0.3

• Optimized and parallelized the sampling stage.
• Fix bugs in the bloom filter, so it can handle large genome that creating a bit table much larger than 2^32 bits.

Lighter v1.0.2

• Fix a bug for -maxcor.
• Change the threshold for trusted position. The rule of thumb for choosing alpha changes to 7/C, where C is the coverage.