cashmere

Online spatial search trees

Under development. Documentation may be lacking, bugs may exist.

Running the examples

cargo run --example colordeposit --release -- [options]

Some options to try (the variations are very numerous):

(no options)
--color_metric=rgb
--color_metric=xyz
--ordering=-G

These take a long time:

--ordering=ordered:+R+G+B
--ordering=ordered:+B+G+R --color_metric=rgb
--ordering=ordered:-l
--ordering=ordered:-v

Motivation

Many libraries exist implementing k-dimensional spatial partitioning trees; the underlying algorithms are relatively straightforward and have many applications. However, for various reasons some features often taken for granted in other common data structures are rarely found:

• Mutability: Many k-d tree implementations opt for a build-once, query-many-times design. Removing or even adding data to the structure once it is initialized is often impossible.
• Balance: In structures that do implement mutability, balance guarantees are often absent. Outer bounds for the may need to be provided, outside which the tree will either be pathologically imbalanced or not accept data at all. Regions of higher density in the data may have an unavoidably greater tree depth, and trees whose data is first inserted pathologically sorted in any way may degenerate to quadratic performance.
• Other constraints:
  • Most implementations accept a limited number of data types, and function in a limited number of dimensions.
  • Many (if not most) implementations that allow mutation require knowing both the inserted value and the associated data to change it, mandating a secondary data structure for some use cases.
  • Even world-class k-d tree implementations may suffer from seemingly bizarre limitations, such as an inability to handle too many items that coexist on a single axis-aligned plane.

This is the author's attempt to remedy all those problems, and more besides.

Goals

• Online mutability: Performant and easy mutation of the values. The structure should be immediately available for searching in between every modification.
• Performance guarantees: Inserting data incrementally in any order should be reasonably fast and not result in poor search performance. No bounding box of the contained data should need to be known ahead of time, and no combination or repetition of values should result in a crash or an unusable/invalid structure. The structure should also not be limited in size: ideally there should be very few knobs to tune performance, and they should not be tradeoffs with maximum capacity.
• Speed: Ideally the data structures herein should be competitive with world-class search trees in terms of search performance, even when built incrementally. Tradeoffs between housekeeping costs during mutation and search performance should be customizable. As of this writing overall performance is circa 50% that of the best competition (kiddo) in a reasonably non-pathological benchmark, intermixing mutation and nearest-neighbor searches with well-distributed data. Coming revisions and rewrites are likely to close this gap significantly.
• Flexibility:
  • of accepted types -- The structures herein operate on traits, not specific predetermined numeric types. Any custom type should do, including even types with heterogenously typed axes. Currently the needed traits are defined for all primitives, str, std::time types, arrays thereof, references thereof, and heterogenous tuples thereof up to 6 dimensions. Implementing value types for whatever does not already work should be nearly trivial.
  • of capabilities -- The structures herein can be parametrized with statistics, customizable structures that can aggregate the values found in each part of the tree (such as bounding boxes), enhancing both the types of items that can be effectively searched and the ways that they can be searched for. This meshes with a flexible visitor-pattern query API enabling almost any type of query: Exact nearest searches, nearest and k-nearest searches tolerating errors, searches within a radius or area, collision and overlap searches: basic implementations will be provided (pending), and if it doesn't exist it can probably be created.

Non-goals

• Rapid serialization/deserialization: kiddo + rkyv seem to have this cornered. Querying out of a cold memmapped file is a very different kind of goal to optimize for than performant mutability, and at this time it is not a priority and isn't clear whether it is possible to do both well.
• Memory efficiency: While the structures can be quite efficient, and will (as a bonus) release memory as items are removed, it does use heap allocations proportionate to the number of items stored and keeps pointers between them.
• Groundbreaking algorithmic bounds: Balanced k-d trees are generally known to cost O(log^2 n) to modify. Alternatives that perform differently are strangely designed with odd tradeoffs (see "divided k-d trees," which may cost O(sqrt n) to query) or are simply expressing their performance characteristics in terms of ideally distributed inputs -- which is, admittedly, often the case. This crate uses a variation of scapegoat balancing to fight worst-case unbalance (hence the name!). This also means performance guarantees are amortized, so while degenerate cases are avoided (by balancing at all) there may not be ideal bounds on latency (as rebalancing may occasionally be expensive, up to and including a full rebuild).
• Ideal vectorization for each type: At least for now, we will seek to do our best to lay out data in a tantalizing way, then lean on the compiler for the rest.
• Great performance without LTO: Don't forget to turn on thin-LTO!