This is a method to study the phylogenetic relationships among complete genome sequences of different subtypes of viruses.
ComputerdistanceMatrix.java:This is a program for calculating the distance matrix of species. 5596data.rar : This dataset contains 5596 pure subtype HIV sequences.
datacg1625.rar : This dataset contains 1625 Circulating Recombinant Form (CRF) HIV sequences.
PureSequences867.rar: This dataset contains 867 pure subtype HIV sequences.
This program needs to install JDK 1.7, eclipse-jee-mars-2-win32-x86_64 to run.