Added tests for amrfinder integration options #10
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Linux C++ CI | |
| on: | |
| workflow_dispatch: | |
| push: | |
| pull_request: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: prerequisites | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y ncbi-blast+ | |
| - name: make | |
| run: make | |
| - name: test | |
| run: ./test_stxtyper.sh | |
| - name: Upload artifacts on failure | |
| uses: actions/upload-artifact@v4 | |
| if: ${{ failure() }} # only run if the job fails | |
| with: | |
| name: stxtyper-failed-test-linux | |
| path: | | |
| ./* | |
| test/* | |
| retention-days: 14 |