CyCells is a modeling framework to facilitate the creation and use of microbiological agent-based models.
Run from the command line as follows:
> ./CyCells -seed [random seed] -def [.def file] -init [.init file] -dur [duration in seconds] -step [step size in seconds] -hist [output file]
CyCells is a Qt4 application. Follow standard Qt installation procedures:
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Use "qmake" to create a .pro file.
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Add "QT += opengl" to the .pro file to add support for OpenGL
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Run "make" to compile QtCyCells
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Run "make -f Makefile_CyCells" to compile CyCells (command-line version)
CyCells was created by Christina Warrender and is maintained by Drew Levin.
CyCells is licensed by the GNU Public License v3.0
http://www.gnu.org/copyleft/gpl.html
Please Cite CyCells if you use it in an academic capacity:
