Swap footer links to table form

nextstrain_profiles/nextstrain-gisaid/nextstrain_description.md

@@ -3,20 +3,23 @@ Compiled Nextstrain SARS-CoV-2 resources are available at [nextstrain.org/sars-c
 This phylogeny shows evolutionary relationships of SARS-CoV-2 viruses from the ongoing COVID-19 pandemic. Although the genetic relationships among sampled viruses are generally quite clear, there is considerable uncertainty surrounding estimates of specific transmission dates and in reconstruction of geographic spread. Please be aware that specific inferred geographic transmission patterns and temporal estimates are only a hypothesis.
 
 There are millions of complete SARS-CoV-2 genomes available and this number increases every day. This visualization can only handle ~4000 genomes in a single view for performance and legibility reasons. Because of this we subsample available genome data for our analysis views. We provision multiple views to focus subsampling on different geographic regions and different time periods. These views are available through the "Dataset" dropdown on the left or by clicking on the following links:
-- [global / past 6 months](/ncov/gisaid/global/6m/)
-- [Africa / past 6 months](/ncov/gisaid/africa/6m?f_region=Africa)
-- [Asia / past 6 months](/ncov/gisaid/asia/6m?f_region=Asia)
-- [Europe / past 6 months](/ncov/gisaid/europe/6m?f_region=Europe)
-- [North America / past 6 months](/ncov/gisaid/north-america/6m?f_region=North%20America)
-- [Oceania / past 6 months](/ncov/gisaid/oceania/6m?f_region=Oceania)
-- [South America / past 6 months](/ncov/gisaid/south-america/6m?f_region=South%20America)
-- [global / all time](/ncov/gisaid/global/all-time/)
-- [Africa / all time](/ncov/gisaid/africa/all-time?f_region=Africa)
-- [Asia / all time](/ncov/gisaid/asia/all-time?f_region=Asia)
-- [Europe / all time](/ncov/gisaid/europe/all-time?f_region=Europe)
-- [North America / all time](/ncov/gisaid/north-america/all-time?f_region=North%20America)
-- [Oceania / all time](/ncov/gisaid/oceania/all-time?f_region=Oceania)
-- [South America / all time](/ncov/gisaid/south-america/all-time?f_region=South%20America)
+
+region        | time period   | URL
+------------- | ------------- | ---
+global        | past 6 months | [/ncov/gisaid/global/6m](/ncov/gisaid/global/6m)
+Africa        | past 6 months | [/ncov/gisaid/africa/6m](/ncov/gisaid/africa/6m?f_region=Africa)
+Asia          | past 6 months | [/ncov/gisaid/asia/6m](/ncov/gisaid/asia/6m?f_region=Asia)
+Europe        | past 6 months | [/ncov/gisaid/europe/6m](/ncov/gisaid/europe/6m?f_region=Europe)
+North America | past 6 months | [/ncov/gisaid/north-america/6m](/ncov/gisaid/north-america/6m?f_region=North%20America)
+Oceania       | past 6 months | [/ncov/gisaid/oceania/6m](/ncov/gisaid/oceania/6m?f_region=Oceania)
+South America | past 6 months | [/ncov/gisaid/south-america/6m](/ncov/gisaid/south-america/6m?f_region=South%20America)
+global        | all time      | [/ncov/gisaid/global/all-time](/ncov/gisaid/global/all-time)
+Africa        | all time      | [/ncov/gisaid/africa/all-time](/ncov/gisaid/africa/all-time?f_region=Africa)
+Asia          | all time      | [/ncov/gisaid/asia/all-time](/ncov/gisaid/asia/all-time?f_region=Asia)
+Europe        | all time      | [/ncov/gisaid/europe/all-time](/ncov/gisaid/europe/all-time?f_region=Europe)
+North America | all time      | [/ncov/gisaid/north-america/all-time](/ncov/gisaid/north-america/all-time?f_region=North%20America)
+Oceania       | all time      | [/ncov/gisaid/oceania/all-time](/ncov/gisaid/oceania/all-time?f_region=Oceania)
+South America | all time      | [/ncov/gisaid/south-america/all-time](/ncov/gisaid/south-america/all-time?f_region=South%20America)
 
 Site numbering and genome structure uses [Wuhan-Hu-1/2019](https://www.ncbi.nlm.nih.gov/nuccore/MN908947) as reference. The phylogeny is rooted relative to early samples from Wuhan. Temporal resolution assumes a nucleotide substitution rate of 8 × 10^-4 subs per site per year. Mutational fitness is calculated using results from [Obermeyer et al (under review)](https://www.medrxiv.org/content/10.1101/2021.09.07.21263228v1). Full details on bioinformatic processing can be found [here](https://github.com/nextstrain/ncov).
 

nextstrain_profiles/nextstrain-open/nextstrain_description.md

@@ -3,20 +3,23 @@ Compiled Nextstrain SARS-CoV-2 resources are available at [nextstrain.org/sars-c
 This phylogeny shows evolutionary relationships of SARS-CoV-2 viruses from the ongoing COVID-19 pandemic. Although the genetic relationships among sampled viruses are generally quite clear, there is considerable uncertainty surrounding estimates of specific transmission dates and in reconstruction of geographic spread. Please be aware that specific inferred geographic transmission patterns and temporal estimates are only a hypothesis.
 
 There are millions of complete SARS-CoV-2 genomes available on open databases and this number increases every day. This visualization can only handle ~4000 genomes in a single view for performance and legibility reasons. Because of this we subsample available genome data for our analysis views. We provision multiple views to focus subsampling on different geographic regions and different time periods. These views are available through the "Dataset" dropdown on the left or by clicking on the following links:
-- [global / past 6 months](/ncov/open/global/6m/)
-- [Africa / past 6 months](/ncov/open/africa/6m?f_region=Africa)
-- [Asia / past 6 months](/ncov/open/asia/6m?f_region=Asia)
-- [Europe / past 6 months](/ncov/open/europe/6m?f_region=Europe)
-- [North America / past 6 months](/ncov/open/north-america/6m?f_region=North%20America)
-- [Oceania / past 6 months](/ncov/open/oceania/6m?f_region=Oceania)
-- [South America / past 6 months](/ncov/open/south-america/6m?f_region=South%20America)
-- [global / all time](/ncov/open/global/all-time/)
-- [Africa / all time](/ncov/open/africa/all-time?f_region=Africa)
-- [Asia / all time](/ncov/open/asia/all-time?f_region=Asia)
-- [Europe / all time](/ncov/open/europe/all-time?f_region=Europe)
-- [North America / all time](/ncov/open/north-america/all-time?f_region=North%20America)
-- [Oceania / all time](/ncov/open/oceania/all-time?f_region=Oceania)
-- [South America / all time](/ncov/open/south-america/all-time?f_region=South%20America)
+
+region        | time period   | URL
+------------- | ------------- | ---
+global        | past 6 months | [/ncov/open/global/6m](/ncov/open/global/6m)
+Africa        | past 6 months | [/ncov/open/africa/6m](/ncov/open/africa/6m?f_region=Africa)
+Asia          | past 6 months | [/ncov/open/asia/6m](/ncov/open/asia/6m?f_region=Asia)
+Europe        | past 6 months | [/ncov/open/europe/6m](/ncov/open/europe/6m?f_region=Europe)
+North America | past 6 months | [/ncov/open/north-america/6m](/ncov/open/north-america/6m?f_region=North%20America)
+Oceania       | past 6 months | [/ncov/open/oceania/6m](/ncov/open/oceania/6m?f_region=Oceania)
+South America | past 6 months | [/ncov/open/south-america/6m](/ncov/open/south-america/6m?f_region=South%20America)
+global        | all time      | [/ncov/open/global/all-time](/ncov/open/global/all-time)
+Africa        | all time      | [/ncov/open/africa/all-time](/ncov/open/africa/all-time?f_region=Africa)
+Asia          | all time      | [/ncov/open/asia/all-time](/ncov/open/asia/all-time?f_region=Asia)
+Europe        | all time      | [/ncov/open/europe/all-time](/ncov/open/europe/all-time?f_region=Europe)
+North America | all time      | [/ncov/open/north-america/all-time](/ncov/open/north-america/all-time?f_region=North%20America)
+Oceania       | all time      | [/ncov/open/oceania/all-time](/ncov/open/oceania/all-time?f_region=Oceania)
+South America | all time      | [/ncov/open/south-america/all-time](/ncov/open/south-america/all-time?f_region=South%20America)
 
 Site numbering and genome structure uses [Wuhan-Hu-1/2019](https://www.ncbi.nlm.nih.gov/nuccore/MN908947) as reference. The phylogeny is rooted relative to early samples from Wuhan. Temporal resolution assumes a nucleotide substitution rate of 8 × 10^-4 subs per site per year. Mutational fitness is calculated using results from [Obermeyer et al (under review)](https://www.medrxiv.org/content/10.1101/2021.09.07.21263228v1). Full details on bioinformatic processing can be found [here](https://github.com/nextstrain/ncov).