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Plotting of data where the p-value is zero #227

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kdivilov opened this issue Jan 22, 2024 · 2 comments
Closed

Plotting of data where the p-value is zero #227

kdivilov opened this issue Jan 22, 2024 · 2 comments
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@kdivilov
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Description of the bug

If the pipeline (tested only with rnaseq) infers differentially expressed genes with p-values that are equal to 0, they are not plotted in the volcano plot. While this makes sense mathematically (log(0)=undefined), they are the most significantly differentially expressed genes and so would be ones people would want to look at.

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System information

nf-core/differentialabundance version 1.4.0

@kdivilov kdivilov added the bug Something isn't working label Jan 22, 2024
@WackerO
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WackerO commented Jan 30, 2024

Hmm, good catch @kdivilov ! Fixed in #229, does that work?

@WackerO
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WackerO commented Feb 27, 2024

Correction, it is #232 instead which deals with this issue

@WackerO WackerO closed this as completed Feb 27, 2024
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