Load modules for uppmax software versions.

nf-core · Aug 7, 2017 · cb2d932 · cb2d932
1 parent b082006
commit cb2d932
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diff --git a/conf/uppmax-devel.config b/conf/uppmax-devel.config
@@ -73,6 +73,7 @@ process {
   }
   $get_software_versions {
     errorStrategy = 'ignore'
+    module = ['bioinfo-tools', 'FastQC', 'TrimGalore', 'samtools/1.3', 'bismark', 'QualiMap', 'MultiQC']
   }
   // NB: Overwrite this in a config file in the working directory (nextflow.config) or with -c
   // if you have your own installation of MultiQC outside of the environment module system.

diff --git a/conf/uppmax.config b/conf/uppmax.config
@@ -73,6 +73,7 @@ process {
   }
   $get_software_versions {
     errorStrategy = 'ignore'
+    module = ['bioinfo-tools', 'FastQC', 'TrimGalore', 'samtools/1.3', 'bismark', 'QualiMap', 'MultiQC']
   }
   // NB: Overwrite this in a config file in the working directory (nextflow.config) or with -c
   // if you have your own installation of MultiQC outside of the environment module system.