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new module: sentieon/locuscollector #733

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Gwennid opened this issue Sep 22, 2021 · 5 comments
Closed
3 of 4 tasks

new module: sentieon/locuscollector #733

Gwennid opened this issue Sep 22, 2021 · 5 comments
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hackathon2023 Topic for the hackathon of March 2023 new module Adding a new module

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@Gwennid
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Gwennid commented Sep 22, 2021

I think it would be good to have a module for Sentieon (https://bioconda.github.io/recipes/sentieon/README.html) LocusCollector (first step in marking duplicates).

  • This module does not exist yet with the nf-core modules list command
  • There is no open pull request for this module
  • There is no open issue for this module
  • If I'm planning to work on this module, I added myself to the Assignees to facilitate tracking who is working on the module
@Gwennid Gwennid added the new module Adding a new module label Sep 22, 2021
@Gwennid Gwennid mentioned this issue Sep 22, 2021
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@Gwennid
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Gwennid commented May 3, 2022

Exists as a local module in nf-core/raredisease (https://github.com/nf-core/raredisease/tree/dev/modules/local/sentieon)

@edmundmiller
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https://github.com/seqeralabs/nf-sentieon/blob/717e3b4395eb6076715a1cff089c0f82e4b1d449/workflows/sentieon.nf#L43

@ramprasadn ramprasadn added the hackathon2023 Topic for the hackathon of March 2023 label Mar 7, 2023
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asp8200 commented Sep 21, 2023

done

@asp8200 asp8200 closed this as completed Sep 21, 2023
@edmundmiller
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edmundmiller commented Sep 21, 2023 •
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@asp8200 By what PR? Could you link something for reference, please?

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asp8200 commented Sep 21, 2023

@asp8200 By what PR? Could you link something for reference, please?

Closed by #3224

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