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  • University of Dundee
  • Dundee, Scotland

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  1. Meandering-Depths Meandering-Depths Public

    Developing and optimizing a 3D game engine from scratch using OpenGL.

    Scala 1

  2. TorusEvol TorusEvol Public

    This is a Bayesian model for sequence and structure alignment of multiple proteins in a star phylogeny. The structural divergence across time is modelled by letting the dihedral angles of the backb…

    Julia

  3. ArborGen ArborGen Public

    This is a Blender script for procedurally generating biological tree growth animations in 3D.

    Python

  4. Dynamic-Learned-Bloom-Filters Dynamic-Learned-Bloom-Filters Public

    Experimenting with a new approach to the online insertion and deletion of data points in a learned bloom filter (a bloom filter treated as a learned model, so that the keys become training samples)

    Python

  5. dMaSIF-ligand dMaSIF-ligand Public

    This is a Julia implementation of the dMaSIF geometric deep learning model for predicting binding affinity over protein surfaces.

    Jupyter Notebook 1

  6. ChimeIsland ChimeIsland Public

    A WebGL toon-shading demo featuring a proof of concept for Meandering Depths

    JavaScript