New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
FIX] fixes several plotting details in glm reports #4266
Conversation
👋 @Remi-Gau Thanks for creating a PR! Until this PR is ready for review, you can include the [WIP] tag in its title, or leave it as a github draft. Please make sure it is compliant with our contributing guidelines. In particular, be sure it checks the boxes listed below.
For new features:
For bug fixes:
We will review it as quick as possible, feel free to ping us with questions if needed. |
Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## main #4266 +/- ##
==========================================
+ Coverage 91.85% 92.04% +0.19%
==========================================
Files 144 143 -1
Lines 16419 16438 +19
Branches 3434 3445 +11
==========================================
+ Hits 15082 15131 +49
+ Misses 792 764 -28
+ Partials 545 543 -2
Flags with carried forward coverage won't be shown. Click here to find out more. ☔ View full report in Codecov by Sentry. |
Note: consider doing the colormap modifications in a separate PR as the default choice may require a proper discussion. |
Note: review and visualizing the outcome would be easier if #2194 (comment) was addressed first |
Requested a full build to compare to the GLM reports before and after. Will post the links once the builds are done. |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
LGTM.
* fix several issues in glm reports * further fixes * change cmap for glass brain * fix remaining issues * [full doc] request full build * update changelog * [full doc] request full build
…ap with masker report images (#4308) * extract table folding and overlapping * update changelog * Update doc/changes/latest.rst Co-authored-by: bthirion <bertrand.thirion@inria.fr> * FIX] fixes several plotting details in glm reports (#4266) * fix several issues in glm reports * further fixes * change cmap for glass brain * fix remaining issues * [full doc] request full build * update changelog * [full doc] request full build * [FIX] force views in surface plotting to be pairs of `int` or `float` when not a `string` (#4297) * for views to be pairs of int or float when not a string * update changelog * [FIX] fix cut position in nifti maps maskers (#4304) * fix cut position in nifti maps maskers * update changelog * [FIX] remove conftest for externals (#4306) * remove conftest tempita * ignore tempita in pyproject.toml * [MAINT] add script to check duration of test suite (#4231) * add script to check duration of test suite * add comment * comment and refactor * typo * improve paging * add workflow * Update maint_tools/requirements.txt * fail on bad request * upload artefacts * upload artefacts * remove running on PR * Apply suggestions from code review Co-authored-by: Elizabeth DuPre <emd222@cornell.edu> * update doc string * update doc string * refactor --------- Co-authored-by: Elizabeth DuPre <emd222@cornell.edu> * [DOC] display all masker reports in the doc (#4295) * display masker reports in doc * update changelog * refactor * add notebooks * clear cells * [full doc] request full build * add link to examples * [full doc] request full build * fix doc build * [full doc] request full build * [full doc] request full build --------- Co-authored-by: bthirion <bertrand.thirion@inria.fr> Co-authored-by: Elizabeth DuPre <emd222@cornell.edu>
Changes proposed in this pull request:
plot_type="slice"