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ENH: Add MRIQC's custom multiproc runner that allows passing the pool #841

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merged 1 commit into from
Dec 4, 2023

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@oesteban oesteban commented Dec 4, 2023

This is useful to minimize the workers' fingerprint.

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effigies commented Dec 4, 2023

Is there a reason not to contribute this upstream to nipype?

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codecov bot commented Dec 4, 2023

Codecov Report

Attention: 263 lines in your changes are missing coverage. Please review.

Comparison is base (16609f2) 63.36% compared to head (91aa5d9) 61.05%.
Report is 2 commits behind head on master.

Files Patch % Lines
niworkflows/engine/plugin.py 13.48% 263 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##           master     #841      +/-   ##
==========================================
- Coverage   63.36%   61.05%   -2.32%     
==========================================
  Files          53       54       +1     
  Lines        6238     6542     +304     
  Branches      907      952      +45     
==========================================
+ Hits         3953     3994      +41     
- Misses       2099     2362     +263     
  Partials      186      186              
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oesteban commented Dec 4, 2023

Is there a reason not to contribute this upstream to nipype?

None - just my laziness and reducing the maintenance effort of nipype.

There's a quasi-reason in the sense that I had the plan to write a plugin based on asyncio and test it with MRIQC, and this was like the first tiny test of a drop-in plugin implementation.

Can we merge this in here to speed up the deployment of sdcflows (which uses this, so we can test), and at the same time I'll send a PR to nipype?

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effigies commented Dec 4, 2023

Sure

@oesteban oesteban merged commit 546f143 into master Dec 4, 2023
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@oesteban oesteban deleted the enh/multiproc-pass-pool branch December 4, 2023 14:06
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2 participants