Nirfast is an FEM based package for modeling Near-Infrared light transport in tissue.
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README.md

NIRFAST Matlab

v9.1 (3/20/2018)

NIRFAST is a toolkit that consists of two main components:

  1. NIRFASTSlicer - A medical image processing and analysis component built on the 3DSLicer platform
  2. NIRFASTMatlab - The mesh generation and optical computation component built on MATLAB

Most users will need both packages as these work together for many use cases; however, some expert users may only need NIRFASTMatlab.

This README pertains to NIRFASTMatlab only.

INSTALLATION of NIRFASTMatlab

  1. Unzip Nirfast onto your computer.
  2. Open Matlab, and go to File -> Set Path -> Add With Subfolders.
  3. Select the Nirfast folder, then Save and Close.
  4. Type 'nirfast' (no quotes) in the Matlab prompt to start the NIRFASTMatlab GUI.