Add specimens from TURBO to OBI

[turbomam]

The TURBO team has defined some specimens required for our assay templating.

Can the contents of
https://github.com/PennTURBO/turbo-ontology/blob/master/ontologies/robot_implementation/more-specimens.tsv

just be added to
https://github.com/obi-ontology/obi/blob/master/src/ontology/templates/biobank-specimens.tsv ?

[turbomam]

If I have requested a new specimen, do I have to additionally add the corresponding anatomical entity (etc.) to something like a OntoAnimals import text file?

[jamesaoverton]

Yes, for anatomical entities, please add them to https://github.com/obi-ontology/obi/blob/master/src/ontology/OntoFox_inputs/Uberon_input.txt and then run make imports.

[turbomam]

@jamesaoverton it looks like I had to manually copy robot.jar into the build directory

But after that it was fast and easy

[turbomam]

@jamesaoverton I have made three commits on the same pull request #1199

sorry, that's probably a pain for you

If forgot to use the established Mac Excel line ending mechanism. I'm going to do that now and push/request again.

[jamesaoverton]

Multiple commits on a PR is not a problem.

Please run make sort to fix the line endings.