Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fixes #2912 add dorsal iris #2913

Merged
4 commits merged into from
Jun 15, 2023
Merged
Changes from 1 commit
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
8 changes: 8 additions & 0 deletions src/ontology/uberon-edit.obo
Original file line number Diff line number Diff line change
Expand Up @@ -224055,6 +224055,14 @@ relationship: dc-contributor https://orcid.org/0000-0002-0819-0473
relationship: part_of UBERON:0006767 ! head of femur
property_value: dcterms-date "2023-05-30T06:34:18Z" xsd:dateTime

[Term]
id: UBERON:8480063
name: dorsal iris
Copy link

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

If "dorsal rim of the iris" is an exact synonym, consider adding (dbxref PMID:29579253).

def: "The dorsal part of the iris. This region is involved in lens regeneration in urodeles (newts and salamanders) in a process named Wolffian lens regeneration. In these species, lens regeneration proceeds through two steps. The first step involves the entire circumference of the iris pigmented epithelium. The second step is confined to the pigmented epithelial cells located along the dorsal rim of the iris and involves dorsal-specific activation of the Wnt signaling pathway." [PMID:17030116, PMID:29579253]
Copy link

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Consider keeping the first two sentences in the text definition and relegating the rest to a comment.

Copy link

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Also consider if a new GO term 'Wolffian lens regeneration' is warranted.

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Indeed this term does not exist in GO. Should I make a NTR to GO?

relationship: dc-contributor https://orcid.org/0000-0002-0819-0473
relationship: part_of UBERON:0001769 ! iris
property_value: dcterms-date "2023-06-06T08:06:04Z" xsd:dateTime

[Term]
id: UBERON:8500000
name: cranial temporal line
Expand Down