Skip to content
@ohlab

ohlab

Pinned Loading

  1. GRiD GRiD Public

    Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at ultra-low sequencing coverage (> 0.2x).

    Shell 31 6

  2. SMEG SMEG Public

    Strain-level Metagenomic Estimation of Growth rate (SMEG) measures growth rates of microbial strains from complex metagenomic dataset

    Shell 20 6

Repositories

Showing 10 of 17 repositories
  • BioMapAI Public
    ohlab/BioMapAI’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Jul 9, 2024
  • icht_MAGs Public
    ohlab/icht_MAGs’s past year of commit activity
    0 0 0 0 Updated Nov 14, 2023
  • SC2200969_Nasal30pass Public

    Nasal organoid single cell data

    ohlab/SC2200969_Nasal30pass’s past year of commit activity
    1 0 0 0 Updated Jan 31, 2023
  • S.epi-CRISPRi-and-RNA-Seq Public
    ohlab/S.epi-CRISPRi-and-RNA-Seq’s past year of commit activity
    R 1 1 0 0 Updated Nov 11, 2022
  • MECFS_2021 Public

    Data and code for ME/CFS project 2021

    ohlab/MECFS_2021’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Sep 9, 2022
  • reprDB Public
    ohlab/reprDB’s past year of commit activity
    Shell 1 GPL-3.0 3 3 1 Updated Jul 19, 2022
  • Strain_collection Public
    ohlab/Strain_collection’s past year of commit activity
    0 0 0 0 Updated Mar 1, 2022
  • GRiD Public

    Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at ultra-low sequencing coverage (> 0.2x).

    ohlab/GRiD’s past year of commit activity
    Shell 31 6 11 0 Updated May 22, 2020
  • SMEG Public

    Strain-level Metagenomic Estimation of Growth rate (SMEG) measures growth rates of microbial strains from complex metagenomic dataset

    ohlab/SMEG’s past year of commit activity
    Shell 20 6 3 0 Updated May 22, 2020
  • Guide-Finder Public

    Pan-bacterial, genome-wide guide designer

    ohlab/Guide-Finder’s past year of commit activity
    3 2 0 0 Updated Jan 27, 2020
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…