Add scientific name to the assignments table #27
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laughedelic
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Mar 3, 2016
laughedelic
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Mar 7, 2016
This milestone release is huge. It contains a lot of improvements and some important fixes. Here are some higlights: * Features and improvements: - #4, #15: The BLAST reference database and IDs mapping is now configurable - #17: Added RNACentral reference DB (as the default one now) - #18: BLAST options are now configurable - #16: A dataflow API was improved and a pipeline without the Flash step was added - ~~#20~~ #24: For pipelines without Flash you can choose between FASTA and FASTQ input format - Output tables improvements: + #10: Added CSV-headers + #19, #23, #27: Added _taxonomic rank_ and _name_ columns + #6: Split each counts table on two: direct/accumulated + #30: Zero direct counts are filtered out * Important fixes: - #28: Bio4j-NCBITaxonomy database was updated with an important fix for the taxonomic names - #26: Ongoing effort to solve the "Too many open files" exception has been moved to [ohnosequences/loquat#56](ohnosequences/loquat#56) See the full list of pull requests merged in this release in the [v1.0-M2 milestone](https://github.com/ohnosequences/mg7/issues?q=milestone%3Av1.0-M2).
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