0.3.3

Improve error handling

0.4.0-alpha

Addition of an experimental Shiny UI to run the mapping from a web interface.

• Installation is via a Docker image

0.3.2

• Simplification and optimization of code
• Addition of method to extract the result as an annotated data.frame
• Improvement of error handling

0.3.1

Addition of GBMs and usage simplification

• Bundling of the Gut Brain modules.
• Addition of utility functions for switching DBs easily.
• Addition of an example for loading an external database.

0.3.0

Dramatic speed and memory improvement, thanks to changes in the underlying Java library.

• Addition of -n and -Xdistribute options
• Addition of an argument to specify the mem for java jobs
• Speed and memory improvement of underlying Java library
• Addition of Min and and Sum for module score estimation
• Correction of source installation command

0.2.3

Update of the documentation to make it work with non Linux platforms

• Inclusion of omixer-rpm.jar with the source packages
• Addition of a Rbuildignore

0.2.2

Correction of the documentation and inclusion of usage examples.

0.2.1

Minimal interface for seamlessly using omixer-rpm in R

Contains the main function rpm for module generation, and other
utility functions for working with a module database