Skip to content

Commit

Permalink
fix name of trim_sequences in call
Browse files Browse the repository at this point in the history
  • Loading branch information
iskandr committed Apr 25, 2016
1 parent 0b39f78 commit f3be770
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion isovar/translation.py
Original file line number Diff line number Diff line change
Expand Up @@ -255,7 +255,7 @@ def determine_reading_frame_for_variant_sequence(variant_sequence, reference_con
Returns a VariantSequenceInReadingFrame object
"""
cdna_prefix, cdna_alt, cdna_suffix, reference_prefix, n_trimmed_from_reference = \
trim(variant_sequence, reference_context)
trim_sequences(variant_sequence, reference_context)

n_mismatch_before_variant = count_mismatches(reference_prefix, cdna_prefix)

Expand Down

0 comments on commit f3be770

Please sign in to comment.