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Adding IGV locus to the ASCII/PDF vaxrank report templates. #158

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merged 1 commit into from
Feb 26, 2018

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julia326
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We can get a copy-pastable list of IGV loci from the resulting ASCII report by running:

grep IGV <ASCII report path> | awk '{print $NF}'

Fixes #67

@@ -20,6 +19,7 @@ cache:
- $HOME/.cache/pyensembl/GRCh38/ensembl87/
- $HOME/.cache/pyensembl/GRCm38/ensembl87/
- $HOME/.cache/vaxrank
- $HOME/.cache/pip
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Do you think this changes the behavior? If so, I want to standardize this across all the repos.

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I... don't know that it does, but I want to see if it does?

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Coverage Status

Coverage increased (+0.02%) to 86.197% when pulling e3e4054 on add-igv-locus into 018d820 on master.

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Coverage Status

Coverage increased (+0.02%) to 86.197% when pulling e3e4054 on add-igv-locus into 018d820 on master.

@julia326 julia326 merged commit 75783e5 into master Feb 26, 2018
@julia326 julia326 deleted the add-igv-locus branch February 26, 2018 23:11
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3 participants