Repositories list

• BEASTLabs

  Public
  A package for BEAST 2 implementing generally useful stuff

  beast2

  Java

  •4•6•11•0•Updated Oct 27, 2024Oct 27, 2024

• codonsubstmodels

  Public
  Codon substitution models for DNA

  genetic-codebeast2codon-substitution-models

  Java

  •

  GNU Lesser General Public License v2.1

  •0•1•2•0•Updated Oct 15, 2024Oct 15, 2024

• bdsky

  Public
  Birth Death Serial Skyline Model for BEAST2

  birth-deathbeast2

  Java

  •

  GNU General Public License v3.0

  •11•2•3•0•Updated Oct 14, 2024Oct 14, 2024

• rb-beast

  Public
  Automatically exported from code.google.com/p/rb-beast

  Java

  •0•1•0•0•Updated Sep 30, 2024Sep 30, 2024

• beast-classic

  Public
  Automatically exported from code.google.com/p/beast-classic

  beast2

  Java

  •4•1•4•0•Updated Sep 30, 2024Sep 30, 2024

• hmc

  Public
  Help Me Choose when running BEAUti

  CSS

  •

  GNU General Public License v3.0

  •0•1•2•0•Updated Sep 2, 2024Sep 2, 2024

• nested-sampling

  Public
  Nested sampling packagin for BEAST

  Java

  •

  GNU Lesser General Public License v2.1

  •1•11•8•0•Updated Jun 17, 2024Jun 17, 2024

• model-selection

  Public
  Automatically exported from code.google.com/p/model-selection

  beast2path-samplingstepping-stone

  Java

  •3•0•5•0•Updated Aug 8, 2023Aug 8, 2023

• SNAPP

  Public
  A package for BEAST2 implementing SNAPP

  Java

  •7•4•7•0•Updated May 22, 2023May 22, 2023

• beast-geo

  Public
  Automatically exported from code.google.com/p/beast-geo

  Java

  •1•0•2•0•Updated Mar 6, 2023Mar 6, 2023

• phylodynamics

  Public
  Bayesian phylodynamic methods in BEAST2

  beast2

  Java

  •

  GNU General Public License v3.0

  •2•6•2•0•Updated Feb 22, 2023Feb 22, 2023

• bModelTest

  Public
  Bayesian model test package for BEAST 2

  Java

  •

  GNU Lesser General Public License v2.1

  •5•7•2•0•Updated Jan 22, 2023Jan 22, 2023

• cladeage

  Public
  Bayesian estimation of clade ages based on probabilities of fossil sampling

  Java

  •1•0•2•0•Updated Jan 3, 2023Jan 3, 2023

• MGSM

  Public
  Multi gamma and relaxed gamma site model

  Java

  •0•0•0•0•Updated Oct 5, 2022Oct 5, 2022

• substmodels

  Public
  Standard substitution models for BEAST 2

  nucleotide-substitution-models

  Java

  •

  GNU Lesser General Public License v2.1

  •2•7•1•0•Updated Oct 3, 2022Oct 3, 2022

• beast-docs

  Public
  BEAST 2 documentation

  TeX

  •2•2•0•0•Updated Nov 28, 2021Nov 28, 2021

• COVID19fig

  Public
  Figures for COVID19 reports

  0•0•0•0•Updated Apr 29, 2020Apr 29, 2020

• rbeast2

  Public
  R

  •2•1•0•0•Updated Sep 11, 2018Sep 11, 2018

• substBMA_archive

  Public
  Automatically exported from code.google.com/p/subst-bma

  Java

  •0•0•1•0•Updated Feb 24, 2016Feb 24, 2016

• PartitionSampler

  Public
  Substitution Dirichlet process mixture model with data blocks

  Java

  •1•0•0•0•Updated Jul 22, 2015Jul 22, 2015

• beast-graphics

  Public
  Automatically exported from code.google.com/p/beast-graphics

  Java

  •0•0•0•0•Updated May 24, 2015May 24, 2015