Repositories list

• QSP-mets

  Public
  MATLAB

  •

  MIT License

  •1•0•0•0•Updated Oct 16, 2024Oct 16, 2024

• combinatorial_biomarker_testing

  Public
  R

  •

  MIT License

  •1•1•0•0•Updated Oct 11, 2024Oct 11, 2024

• SpaceMarkers-spqsp

  Public
  R

  •

  MIT License

  •1•0•0•0•Updated May 22, 2024May 22, 2024

• QSPIO-TNBC

  Public
  This repository contains the latest QSP platform for TNBC/NSCLC developed by the Popel Systems Biology Laboratory

  MATLAB

  •

  MIT License

  •3•5•0•0•Updated May 4, 2024May 4, 2024

• spQSP_ITH

  Public
  Makefile

  •1•0•0•0•Updated May 3, 2023May 3, 2023

• NSCLC-Pipeline

  Public
  This repository contains codes for the spatial analysis of NSCLC TME

  R

  •1•0•0•0•Updated Apr 15, 2023Apr 15, 2023

• SPQSP_IO_TNBC

  Public
  Code of the extended spQSP version for TNBC

  C++

  •3•1•0•0•Updated Jun 9, 2022Jun 9, 2022

• PDAC-mIHC-processing-pipeline

  Public
  R

  •2•1•0•0•Updated Apr 5, 2022Apr 5, 2022

• HCC-IMC-processing-pipeline

  Public
  R

  •

  MIT License

  •2•2•0•0•Updated Sep 1, 2021Sep 1, 2021

• spQSP-omics-2021

  Public
  model code for spQSP omics (Zhang et al. 2021)

  C++

  •1•1•0•0•Updated Aug 2, 2021Aug 2, 2021

• SPQSP_IO

  Public
  C++

  •

  MIT License

  •1•1•0•0•Updated Jul 9, 2021Jul 9, 2021

• MIBC-Predictive-models

  Public
  This repository includes generated data and codes for paper: 'Predictive models of response to neoadjuvant chemotherapy in muscle-invasive bladder cancer based on nuclear morphology and tissue architecture'.'

  4•0•0•0•Updated Apr 29, 2021Apr 29, 2021

• qspio

  Public
  MATLAB SimBiology-Based Platform for QSP Immune Oncology Models

  MATLAB

  •2•8•0•0•Updated Jan 8, 2021Jan 8, 2021

• SpatHeterogeneity-TNBC

  Public
  R

  •1•3•0•0•Updated May 10, 2020May 10, 2020