A Python implementation of Foroutan et al (doi:10.1101/231217) simple sample scoring method for gene-set enrichment analysis
A package of functions that can be used to implement singscore.
Future features will include interactivity in plots and plotting of a landscape of scores.
Author: Kristy Horan
Brief Description: This collection of methods will take a gene set or signature and a single sample (although multiple samples are also acceptable) and return a score reflective of the gene-set or signature enrichment for that single sample.
An example workflow can be seen on the singscore wiki
Or an example script with example input and output are also supplied in https://github.com/kristyhoran/singscore/tree/master/singscore/test