Fixes a bug when using --nofix

[zrt]

self.protcomplex, self.filetype = read_pdb(self.corrected_pdb, as_string=True)

This line (link ) sets as_string=True, but the self.corrected_pdb may fallback to pdbpath (when use --nofix or PDBParser meets some errors, see link1 and link2 ).

I changed this line to fix this problem.

self.protcomplex, self.filetype = read_pdb(self.corrected_pdb, as_string= (self.corrected_pdb != pdbpath)) 

Thank you.

[fkaiserbio]

approved

[fkaiserbio]

Thanks for this contribution!