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The artic pipeline uses longshot after medaka to produce some ancilliary statistics of SARS-CoV-2 variants. The header associated with some probabilities incorrectly specifies some numbers as integer when in fact they are written as floats in teh records of the file, see nanoporetech/medaka#213
From src/print_output.rs:
let headerstr3 = format!("##INFO=<ID=PH,Number=G,Type=Integer,Description=\"PHRED-scaled Probabilities of Phased Genotypes\">
The text was updated successfully, but these errors were encountered:
The artic pipeline uses longshot after medaka to produce some ancilliary statistics of SARS-CoV-2 variants. The header associated with some probabilities incorrectly specifies some numbers as integer when in fact they are written as floats in teh records of the file, see nanoporetech/medaka#213
From
src/print_output.rs
:The text was updated successfully, but these errors were encountered: