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Try to merge in mortars. #136

Merged
merged 446 commits into from
Jul 6, 2018
Merged

Try to merge in mortars. #136

merged 446 commits into from
Jul 6, 2018

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keileg
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@keileg keileg commented Jul 5, 2018

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alessiofumagalli and others added 30 commits January 24, 2018 16:34
@alessiofumagalli
fix compute geometry for grid bucket
b5a5f74
@alessiofumagalli
add computation of the diameter for the grid bucket on the mortar grids
a2da3b8
@alessiofumagalli
add cell diameter for mortar grid
cf64438
@alessiofumagalli
fix dual mortar coupler
2414d50
@keileg
minor cleanup of Geiger 3D for mortar paper
c299871
@keileg
Better treatment of boundary conditions for 3D geiger mortars
8ca7aaf
@keileg
More unit tests for Darcy mortar fv
299ce0f
@keileg
New unit test for boundary pressure recovery for FV discretizations
bfe7fc3
@keileg
Update of test_mortars after renaming of mortar grid variables
e3aef23
@keileg
Unit test for fv darcy mortar also cover mpfa
560a878
@keileg
Fix sign error when recovering boundary pressure in mpfa
34486f0
@keileg
Additional unit test for boundary pressure recovery in fv
060f52e
@alessiofumagalli
add standard functions to __init__.py s
a4ad783
@alessiofumagalli
re-arrange vem_source and fem source
59e3737
@alessiofumagalli
small modifications to rt0 and mpfa due to __init__.py
6f3b85c
@alessiofumagalli
remove old example files
b4dab6d
@alessiofumagalli
update example 1 for legacy paper
656ce34
@alessiofumagalli
add example 2 for legacy mortar
08d5517
@alessiofumagalli
example 2 for mortar paper
20b9e4b
@alessiofumagalli
remove useless function for rt0 (copied by vem)
6966f92
@alessiofumagalli
bug fix for rt0 in 3d
bbab72d
@keileg
Bugfix in matching of 2d grids. Used for mortars
b1e8b26
Changed Jacobian to be an array of sub jacobians instead of one big.
72f0933 
also added init function for creating several independent variables
Added unit-tests for variable init
39490de
@keileg
Unit test for mortar mappings in 2d and 3D.
3e3c280 
Only geometry, no numerics for now.
@keileg
Create simplex grid also for empty fracture networks
459b6a2
Added method for assemble full jacobi. Also fixed bug in multiplying …
c9d3378 
…a vector
Added integration tests for ad
7d39c4d
Added utils module in porepy ( should have been added a few commits ago)
53fd6cf
Added a discretize function to tpfa_coupling
4bdbe8a
IvarStefansson and others added 16 commits June 29, 2018 11:46
Updated integration test: test_fractured_mpsa and added fractured mps…
8700acf 
…a to init
@keileg
Updates to legacy_mortar runscript 3D
290f457
@keileg
Update example1/benchmark1 to use correct mortar grid and parameters.
61dc888
@keileg
Minor fix of example
83aa803
@keileg
Disabled test using fv elimination
a82a7fc
@keileg
Fix of parameter mappings in integration test for dual_darcy
c7daf30
@keileg
Added comments to refinement.refine_grid_1d()
7471bdd
@keileg
Update of tests for grid refinement to use correct function names etc.
fb6de56
@keileg
Fix of import in integration test for fv convergence
39b781e
@keileg
Minor fix of test for fv boundary pressure recovery
8fee94d
@keileg
Account for special case in known solution in test_grid_refinement
fa1c1b8
Fixed the coupler so that it can handle several different mortar vari…
c81807d 
…ables.

I also made a quite ugly hack in Parabolic to make that work for both advective,
 diffisuive, and advective-difusive equations. This fixed all errors resulting in a mixing of dofs

You now have to specify how many sets of mortar variables you want by passing
 a list of length # of mortar sets. If the list contains None at a location,
 it means you want to add the degree of freedom, but skip the discretization of it.

Fixed unittests
@keileg
Fix of example1/benchmark1/test_vem.py
87ea0d3
@keileg
Change of reference pressures for integration test test_darcy.
bbd294c 
The implementation of mortars have slightly changed the physical
interpretation of the MPFA / TPFA discretization, thus modifying which
pressure values can be expected of the method.
@keileg
Fix of source term in DualEllipticModel
a5be27e
@keileg
Disable old tests related to grid refinement and mortars
1be039e
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coveralls commented Jul 5, 2018 •
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Coverage Status

Coverage decreased (-1.2%) to 76.254% when pulling e0060ae on mortars into d69ae27 on develop.

@keileg keileg merged commit d8e4005 into develop Jul 6, 2018
@keileg keileg deleted the mortars branch July 6, 2018 12:37
This was referenced Jul 6, 2018
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3 participants
@keileg @coveralls @alessiofumagalli