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The analysis commands for thoracic ganglia transcriptome of Fenneropenaeus merguiensis

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Thoracic ganglia transcriptome across four ovarian development stages in Fenneropenaeus merguiensis : Data analysis pipeline

This repository provides a reproducible code and software used to analyzed our transcriptome dataset. In this work, most bioinformatics softwares are available on Bioconda, so we mainly used Miniconda3 to manage environment and download software via bioconda channel for each analysis.

To use Bioconda, please see Bioconda home page for more details.

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Yodsawat P, Nuanpirom J, Sathapondecha P, Sangket U. RNA-Seq dataset of thoracic ganglia transcriptome across four ovarian development stages in Fenneropenaeus merguiensis. Data Brief. 2021 Apr 20;36:107053. doi: 10.1016/j.dib.2021.107053. PMID: 33997198; PMCID: PMC8100087.

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The analysis commands for thoracic ganglia transcriptome of Fenneropenaeus merguiensis

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